Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.84□□□□□ -0.51
TRGV9Q99603 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.84□□□□□ -0.51
TRGV9Q99603 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.84□□□□□ -0.51
TRGV9Q99603 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV9Q99603 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.84□□□□□ -0.51
TRGV9Q99603 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
TRGV9Q99603 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TRGV9Q99603 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
TRGV9Q99603 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV9Q99603 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV9Q99603 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
TRGV9Q99603 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TRGV9Q99603 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV9Q99603 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TRGV9Q99603 AC092135.3-201ENST00000624151 1846 ntBASIC11.83□□□□□ -0.51
TRGV9Q99603 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
TRGV9Q99603 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TRGV9Q99603 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TRGV9Q99603 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.83□□□□□ -0.52
TRGV9Q99603 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.83□□□□□ -0.52
TRGV9Q99603 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV9Q99603 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV9Q99603 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
TRGV9Q99603 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.83□□□□□ -0.52
TRGV9Q99603 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.83□□□□□ -0.52
TRGV9Q99603 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.83□□□□□ -0.52
TRGV9Q99603 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.83□□□□□ -0.52
TRGV9Q99603 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
TRGV9Q99603 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.83□□□□□ -0.52
TRGV9Q99603 AC027369.6-201ENST00000525520 931 ntBASIC11.83□□□□□ -0.52
TRGV9Q99603 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV9Q99603 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV9Q99603 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV9Q99603 SNHG9-202ENST00000564014 471 ntBASIC11.83□□□□□ -0.52
TRGV9Q99603 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.83□□□□□ -0.52
TRGV9Q99603 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV9Q99603 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV9Q99603 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.83□□□□□ -0.52
TRGV9Q99603 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV9Q99603 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
TRGV9Q99603 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.83□□□□□ -0.52
TRGV9Q99603 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV9Q99603 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TRGV9Q99603 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.83□□□□□ -0.52
TRGV9Q99603 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 AL157414.3-201ENST00000624276 1954 ntBASIC11.83□□□□□ -0.52
TRGV9Q99603 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.83□□□□□ -0.52
TRGV9Q99603 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TRGV9Q99603 AC093525.8-201ENST00000624099 1342 ntBASIC11.83□□□□□ -0.52
TRGV9Q99603 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TRGV9Q99603 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV9Q99603 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms