Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 RN7SKP175-201ENST00000408472 289 ntBASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 AL807761.2-201ENST00000422849 729 ntBASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 SRP14-204ENST00000558720 780 ntTSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 NAV1-210ENST00000593583 726 ntBASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 AC139749.1-202ENST00000617529 3139 ntBASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 AL512306.1-201ENST00000432698 848 ntBASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 AC063952.3-201ENST00000467756 308 ntBASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 ORAOV1P1-201ENST00000503108 395 ntBASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 AC084262.1-201ENST00000567818 751 ntBASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 AC008536.3-201ENST00000623282 1599 ntBASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 MESTP3-201ENST00000503460 968 ntBASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 CTBP2P6-201ENST00000526402 1229 ntBASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 MED11-202ENST00000573708 802 ntTSL 2 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 KRT18P9-201ENST00000604826 1300 ntBASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 AC007292.2-201ENST00000593524 1812 ntBASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 CHCHD2P9-201ENST00000461726 456 ntBASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD1Q96PZ7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms