Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 AC097724.1-201ENST00000609581 426 ntBASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 AC073347.1-201ENST00000421633 2643 ntBASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 AC020658.6-201ENST00000623564 1870 ntBASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 NFIC-211ENST00000641145 8399 ntBASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 CICP11-201ENST00000434745 2827 ntBASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 DPM3-202ENST00000368399 517 ntBASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 AC021723.1-201ENST00000486306 515 ntBASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 IMP3P2-201ENST00000489760 475 ntBASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 AC245884.6-201ENST00000515672 1067 ntBASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 BNIP3P13-201ENST00000599968 566 ntBASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 AC100757.4-201ENST00000626934 759 ntBASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYNGAP1Q96PV0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 AL133466.1-201ENST00000447582 150 ntBASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 RN7SL720P-201ENST00000488178 304 ntBASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 AC106794.1-201ENST00000506935 792 ntBASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 AC013355.1-201ENST00000562625 723 ntBASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.11■□□□□ 0.33
SYNGAP1Q96PV0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms