Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PTCHD1Q96NR3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PTCHD1Q96NR3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PTCHD1Q96NR3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 AL157414.3-201ENST00000624276 1954 ntBASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 BOLA2P3-201ENST00000404566 256 ntBASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 AC007551.1-201ENST00000457394 519 ntBASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 FTH1P14-201ENST00000482930 551 ntBASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 IGHV3-71-201ENST00000523324 359 ntBASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 AC017083.2-201ENST00000608069 979 ntBASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 OR2I1P-209ENST00000641730 5365 ntBASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.31□□□□□ -0.12
PTCHD1Q96NR3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 ARSEP1-201ENST00000420443 635 ntBASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 ATP5G2P4-201ENST00000442175 420 ntBASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 AC022616.1-201ENST00000518688 554 ntBASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 AC097376.2-205ENST00000610159 5334 ntBASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 WASH3P-207ENST00000560956 1394 ntBASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTCHD1Q96NR3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms