Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKL2Q92772 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKL2Q92772 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKL2Q92772 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKL2Q92772 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDKL2Q92772 AL360270.3-201ENST00000609118 1348 ntBASIC15.35■□□□□ 0.05
CDKL2Q92772 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.35■□□□□ 0.05
CDKL2Q92772 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKL2Q92772 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKL2Q92772 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKL2Q92772 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
CDKL2Q92772 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKL2Q92772 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKL2Q92772 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKL2Q92772 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKL2Q92772 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKL2Q92772 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.35■□□□□ 0.05
CDKL2Q92772 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKL2Q92772 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.35■□□□□ 0.05
CDKL2Q92772 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDKL2Q92772 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKL2Q92772 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.34■□□□□ 0.05
CDKL2Q92772 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.34■□□□□ 0.05
CDKL2Q92772 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
CDKL2Q92772 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.34■□□□□ 0.05
CDKL2Q92772 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.34■□□□□ 0.05
CDKL2Q92772 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CDKL2Q92772 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.34■□□□□ 0.05
CDKL2Q92772 TSEN15P1-201ENST00000423257 515 ntBASIC15.34■□□□□ 0.05
CDKL2Q92772 AP000347.1-202ENST00000435868 847 ntBASIC15.34■□□□□ 0.05
CDKL2Q92772 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.34■□□□□ 0.05
CDKL2Q92772 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.34■□□□□ 0.05
CDKL2Q92772 KLF2P3-201ENST00000451977 1087 ntBASIC15.34■□□□□ 0.05
CDKL2Q92772 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.34■□□□□ 0.05
CDKL2Q92772 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDKL2Q92772 ZNF890P-202ENST00000530367 1156 ntBASIC15.34■□□□□ 0.05
CDKL2Q92772 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.34■□□□□ 0.05
CDKL2Q92772 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.34■□□□□ 0.05
CDKL2Q92772 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CDKL2Q92772 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.34■□□□□ 0.05
CDKL2Q92772 AC025678.2-201ENST00000562061 970 ntBASIC15.34■□□□□ 0.05
CDKL2Q92772 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.34■□□□□ 0.05
CDKL2Q92772 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.34■□□□□ 0.05
CDKL2Q92772 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CDKL2Q92772 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.34■□□□□ 0.05
CDKL2Q92772 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDKL2Q92772 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.34■□□□□ 0.05
CDKL2Q92772 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDKL2Q92772 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.34■□□□□ 0.05
CDKL2Q92772 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDKL2Q92772 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDKL2Q92772 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.33■□□□□ 0.05
CDKL2Q92772 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDKL2Q92772 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDKL2Q92772 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDKL2Q92772 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.33■□□□□ 0.04
CDKL2Q92772 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CDKL2Q92772 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDKL2Q92772 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CDKL2Q92772 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.33■□□□□ 0.04
CDKL2Q92772 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.33■□□□□ 0.04
CDKL2Q92772 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.33■□□□□ 0.04
CDKL2Q92772 AC004967.1-201ENST00000453589 447 ntBASIC15.33■□□□□ 0.04
CDKL2Q92772 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.33■□□□□ 0.04
CDKL2Q92772 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 AC109322.1-201ENST00000524499 1264 ntBASIC15.33■□□□□ 0.04
CDKL2Q92772 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.33■□□□□ 0.04
CDKL2Q92772 AC044860.1-202ENST00000559481 777 ntBASIC15.33■□□□□ 0.04
CDKL2Q92772 AC140878.1-201ENST00000565277 250 ntBASIC15.33■□□□□ 0.04
CDKL2Q92772 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.33■□□□□ 0.04
CDKL2Q92772 AL596442.2-201ENST00000610240 980 ntBASIC15.33■□□□□ 0.04
CDKL2Q92772 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CDKL2Q92772 AC134684.3-201ENST00000641758 218 ntBASIC15.33■□□□□ 0.04
CDKL2Q92772 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CDKL2Q92772 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms