Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC009404.1-202ENST00000439955 968 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 CMTM1-206ENST00000457188 765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 CMTM1-215ENST00000531885 590 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 SNX20-205ENST00000610485 557 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 ZBTB37-202ENST00000367702 1337 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 CYP17A1-AS1-201ENST00000369884 491 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC016735.1-201ENST00000457457 237 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC104123.1-201ENST00000502645 473 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC018629.1-201ENST00000623381 1736 ntBASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AP000926.2-201ENST00000469983 358 ntBASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 CMC2-202ENST00000486645 766 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC113346.2-201ENST00000502684 457 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 IGHV3OR16-11-201ENST00000565524 349 ntBASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 TRBV22-1-201ENST00000424543 337 ntBASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 RNU1-80P-201ENST00000459500 161 ntBASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 ELOC-208ENST00000523815 719 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 snoZ6.3-201ENST00000583496 76 ntBASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 MIR6720-201ENST00000611664 98 ntBASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE2Q8WXH0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 HDGF-202ENST00000368206 960 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms