Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 KHSRPP1-201ENST00000427983 1768 ntBASIC13.53□□□□□ -0.24
RNF138Q8WVD3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.53□□□□□ -0.24
RNF138Q8WVD3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 MIR326-201ENST00000362220 95 ntBASIC13.53□□□□□ -0.24
RNF138Q8WVD3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 Z93015.1-201ENST00000451718 390 ntBASIC13.53□□□□□ -0.24
RNF138Q8WVD3 RPL13AP20-201ENST00000459725 609 ntBASIC13.53□□□□□ -0.24
RNF138Q8WVD3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 RN7SL560P-201ENST00000577943 264 ntBASIC13.53□□□□□ -0.24
RNF138Q8WVD3 AC132192.2-201ENST00000596206 1147 ntBASIC13.53□□□□□ -0.24
RNF138Q8WVD3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 AL136301.1-201ENST00000615830 422 ntBASIC13.53□□□□□ -0.24
RNF138Q8WVD3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 AC103702.1-201ENST00000548801 2630 ntBASIC13.53□□□□□ -0.24
RNF138Q8WVD3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF138Q8WVD3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RNF138Q8WVD3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 MIR663B-201ENST00000408361 115 ntBASIC13.52□□□□□ -0.25
RNF138Q8WVD3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 CICP12-201ENST00000455801 843 ntBASIC13.52□□□□□ -0.25
RNF138Q8WVD3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 DUX4L46-201ENST00000566845 751 ntBASIC13.52□□□□□ -0.25
RNF138Q8WVD3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNF138Q8WVD3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms