Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 MED15P5-201ENST00000423150 992 ntBASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 ADH5P3-201ENST00000433842 1137 ntBASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 SPCS2P4-201ENST00000436160 681 ntBASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 TARDBPP1-201ENST00000442013 1203 ntBASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 AC027601.4-201ENST00000611259 610 ntBASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 AC139530.3-201ENST00000620344 690 ntBASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 AL513190.1-201ENST00000621254 727 ntBASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.19■□□□□ 0.02
RAB3IL1Q8TBN0 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 AL137784.3-201ENST00000623858 2288 ntBASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 RARRES2P9-201ENST00000565168 469 ntBASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB3IL1Q8TBN0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 MBLAC2-202ENST00000514906 1936 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms