Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NKX2-3Q8TAU0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.82■□□□□ 0.44
NKX2-3Q8TAU0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NKX2-3Q8TAU0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NKX2-3Q8TAU0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.82■□□□□ 0.44
NKX2-3Q8TAU0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
NKX2-3Q8TAU0 AC106881.1-201ENST00000605849 3329 ntBASIC17.82■□□□□ 0.44
NKX2-3Q8TAU0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 AHCYP2-201ENST00000430630 1300 ntBASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 AC104982.3-201ENST00000581995 514 ntBASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 MIR7845-201ENST00000618396 99 ntBASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 ENPP7P14-201ENST00000621765 1040 ntBASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 AC013726.1-201ENST00000563747 2285 ntBASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NKX2-3Q8TAU0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 MTX1P1-201ENST00000440904 838 ntBASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 CICP14-201ENST00000629111 2732 ntBASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.8■□□□□ 0.44
NKX2-3Q8TAU0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.79■□□□□ 0.44
NKX2-3Q8TAU0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms