Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 AP001582.1-201ENST00000525856 295 ntBASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 CLUHP6-201ENST00000580789 941 ntBASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 AC023090.2-201ENST00000625182 2110 ntBASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 AC113367.3-201ENST00000508316 1912 ntBASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 GPR53P-205ENST00000457298 1084 ntBASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 PTP4A1P2-201ENST00000546033 454 ntBASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 AC005252.2-201ENST00000624630 1141 ntBASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
SMARCC2Q8TAQ2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.71■□□□□ 0.42
SMARCC2Q8TAQ2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.71■□□□□ 0.42
SMARCC2Q8TAQ2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 KRT17P8-201ENST00000540749 863 ntBASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 AP001063.1-201ENST00000568332 529 ntBASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 AC009486.1-201ENST00000569860 813 ntBASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 AL162274.1-201ENST00000617191 1098 ntBASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms