Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 AL512384.1-201ENST00000406683 331 ntBASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 EIF3FP3-201ENST00000434851 1086 ntBASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 AC026434.2-201ENST00000506094 1078 ntBASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 AC022616.1-201ENST00000518688 554 ntBASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 AP005019.2-201ENST00000615104 511 ntBASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 CU634019.7-201ENST00000624153 1185 ntBASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 FP236241.2-201ENST00000624906 1185 ntBASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH19Q8TAB3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 AC018665.1-201ENST00000622927 1362 ntBASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 ACKR1-201ENST00000368121 1240 ntBASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 GIMAP3P-201ENST00000495150 836 ntBASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 AC132938.2-201ENST00000579188 680 ntBASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 AL591163.1-201ENST00000641757 987 ntBASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 INTS4P1-203ENST00000641008 3683 ntBASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH19Q8TAB3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH19Q8TAB3 AC113367.3-201ENST00000508316 1912 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms