Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFWD2Q8NHY2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.04■□□□□ -0
RFWD2Q8NHY2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFWD2Q8NHY2 AP000842.3-202ENST00000569238 1080 ntBASIC15.04■□□□□ -0
RFWD2Q8NHY2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.04■□□□□ -0
RFWD2Q8NHY2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RFWD2Q8NHY2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.04■□□□□ -0
RFWD2Q8NHY2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.04■□□□□ -0
RFWD2Q8NHY2 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RFWD2Q8NHY2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RFWD2Q8NHY2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RFWD2Q8NHY2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.04■□□□□ -0
RFWD2Q8NHY2 AC130686.1-201ENST00000622936 2466 ntBASIC15.04■□□□□ -0
RFWD2Q8NHY2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.04■□□□□ -0
RFWD2Q8NHY2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.04■□□□□ -0
RFWD2Q8NHY2 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFWD2Q8NHY2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFWD2Q8NHY2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RFWD2Q8NHY2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.04■□□□□ -0
RFWD2Q8NHY2 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RFWD2Q8NHY2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.04■□□□□ -0
RFWD2Q8NHY2 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RFWD2Q8NHY2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.03■□□□□ -0
RFWD2Q8NHY2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 AL355306.1-201ENST00000415580 579 ntBASIC15.03■□□□□ -0
RFWD2Q8NHY2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 AL671277.1-201ENST00000429656 993 ntBASIC15.03■□□□□ -0
RFWD2Q8NHY2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RFWD2Q8NHY2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFWD2Q8NHY2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 AP3S2-216ENST00000617003 1561 ntBASIC15.02■□□□□ -0
RFWD2Q8NHY2 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFWD2Q8NHY2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFWD2Q8NHY2 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RFWD2Q8NHY2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RFWD2Q8NHY2 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFWD2Q8NHY2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFWD2Q8NHY2 PPT1-213ENST00000641319 2388 ntBASIC15.02■□□□□ -0
RFWD2Q8NHY2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RFWD2Q8NHY2 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFWD2Q8NHY2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
RFWD2Q8NHY2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 YBX2P1-201ENST00000394192 760 ntBASIC15.02■□□□□ -0
RFWD2Q8NHY2 AC104457.1-201ENST00000401024 814 ntBASIC15.02■□□□□ -0
RFWD2Q8NHY2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.02■□□□□ -0
RFWD2Q8NHY2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms