Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 AL512356.2-201ENST00000546955 174 ntBASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 AL133215.2-201ENST00000609242 977 ntBASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 AC003101.2-201ENST00000612557 442 ntBASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 MIR6080-201ENST00000617359 66 ntBASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 LINC00628-201ENST00000628516 1289 ntBASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PIK3C3Q8NEB9 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 AL035456.1-201ENST00000456064 1369 ntBASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 KRT8P12-202ENST00000472924 1397 ntBASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 HLA-J-203ENST00000494367 1087 ntBASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 AC025678.2-201ENST00000562061 970 ntBASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.28□□□□□ -0.12
PIK3C3Q8NEB9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms