Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 AC018442.1-201ENST00000421439 2061 ntBASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 AL049840.4-201ENST00000602422 811 ntBASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 AC093813.1-201ENST00000605066 256 ntBASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 AC107373.2-201ENST00000607735 490 ntBASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 AC099568.2-201ENST00000609194 695 ntBASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 GPALPP1-207ENST00000611650 899 ntBASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 Z82170.1-201ENST00000625081 3192 ntBASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
LSMEM1Q8N8F7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 CICP17-201ENST00000418553 2377 ntBASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 NUS1P3-201ENST00000423502 862 ntBASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 AC092183.1-201ENST00000469884 875 ntBASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 AC093214.1-201ENST00000511688 1107 ntBASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 RNA5SP421-201ENST00000516864 134 ntBASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 BRI3BPP1-201ENST00000594224 787 ntBASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 AC099521.3-201ENST00000624251 2938 ntBASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.93□□□□□ -0.18
LSMEM1Q8N8F7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LSMEM1Q8N8F7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms