Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 MIR4469-201ENST00000583919 79 ntBASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 RN7SL828P-201ENST00000607615 303 ntBASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIML2Q8N7C3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 AC004461.1-201ENST00000412461 403 ntBASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 BANF1P1-201ENST00000553684 263 ntBASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 COL6A4P2-202ENST00000504443 2753 ntBASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRIML2Q8N7C3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 SPDYE7P-202ENST00000420373 878 ntBASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 FAM58DP-201ENST00000428076 619 ntBASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 MTND6P24-201ENST00000440466 518 ntBASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.74□□□□□ -0.05
TRIML2Q8N7C3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms