Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 BCRP1-201ENST00000444246 691 ntBASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AC092552.1-201ENST00000547243 906 ntBASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AC123567.1-201ENST00000548294 1261 ntBASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 SPCS2P1-201ENST00000561636 679 ntBASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AC120045.2-201ENST00000567334 178 ntBASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 LINC02560-201ENST00000596379 459 ntBASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 TMEM261P1-201ENST00000604899 340 ntBASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 MIR8072-201ENST00000614241 80 ntBASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AC007431.3-201ENST00000623221 587 ntBASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 BX539320.1-201ENST00000623759 877 ntBASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AL158070.2-201ENST00000623713 1621 ntBASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TTC9CQ8N5M4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TTC9CQ8N5M4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.02□□□□□ -0.48
TTC9CQ8N5M4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TTC9CQ8N5M4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
TTC9CQ8N5M4 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TTC9CQ8N5M4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TTC9CQ8N5M4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.02□□□□□ -0.48
TTC9CQ8N5M4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TTC9CQ8N5M4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TTC9CQ8N5M4 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.02□□□□□ -0.48
TTC9CQ8N5M4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TTC9CQ8N5M4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 C1QBPP1-201ENST00000400117 770 ntBASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 AL132655.2-201ENST00000596276 594 ntBASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 AC008761.3-201ENST00000624803 892 ntBASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 PRSS30P-206ENST00000641773 873 ntBASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TTC9CQ8N5M4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms