Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 CICP12-201ENST00000455801 843 ntBASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 AC087481.3-201ENST00000602886 1894 ntBASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS4Q8IUM7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 AP000845.1-201ENST00000581677 2131 ntBASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 KRT8P21-201ENST00000430398 1491 ntBASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 TBC1D3J-201ENST00000620719 1426 ntBASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 AC026316.1-201ENST00000398900 414 ntBASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 RPL17P11-201ENST00000417593 544 ntBASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 AL035414.1-201ENST00000451327 857 ntBASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 AC103691.2-201ENST00000618824 433 ntBASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 SALL4P5-201ENST00000419001 1760 ntBASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 PCDHA1-201ENST00000378133 2726 ntBASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 AC136759.1-202ENST00000530858 2194 ntBASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NPAS4Q8IUM7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 AL157407.1-201ENST00000435784 904 ntBASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 FGFR3P1-201ENST00000449999 601 ntBASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 NOC2LP1-201ENST00000450578 752 ntBASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 IQSEC3P1-201ENST00000538799 536 ntBASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 MIR3147-201ENST00000577811 66 ntBASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS4Q8IUM7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms