Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 C2orf27AP3-201ENST00000434123 579 ntBASIC14.57□□□□□ -0.08
RAB43Q86YS6 AC016694.1-201ENST00000434179 700 ntBASIC14.57□□□□□ -0.08
RAB43Q86YS6 FO681548.1-201ENST00000455617 1132 ntBASIC14.57□□□□□ -0.08
RAB43Q86YS6 AC007551.1-201ENST00000457394 519 ntBASIC14.57□□□□□ -0.08
RAB43Q86YS6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 AL354718.3-201ENST00000616414 581 ntBASIC14.57□□□□□ -0.08
RAB43Q86YS6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 CR382287.1-201ENST00000623954 586 ntBASIC14.57□□□□□ -0.08
RAB43Q86YS6 AC005252.2-201ENST00000624630 1141 ntBASIC14.57□□□□□ -0.08
RAB43Q86YS6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB43Q86YS6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB43Q86YS6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 ACKR1-201ENST00000368121 1240 ntBASIC14.56□□□□□ -0.08
RAB43Q86YS6 AC093433.1-201ENST00000458048 571 ntBASIC14.56□□□□□ -0.08
RAB43Q86YS6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 AC015910.1-201ENST00000579400 975 ntBASIC14.56□□□□□ -0.08
RAB43Q86YS6 AC107373.2-201ENST00000607735 490 ntBASIC14.56□□□□□ -0.08
RAB43Q86YS6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 DRD5P1-201ENST00000456605 1438 ntBASIC14.56□□□□□ -0.08
RAB43Q86YS6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB43Q86YS6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB43Q86YS6 LINC00528-201ENST00000600723 2160 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms