Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 AC117489.1-201ENST00000625169 3217 ntBASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 ELK1P1-201ENST00000485699 580 ntBASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 API5-211ENST00000534695 560 ntTSL 5 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 AC055811.4-201ENST00000624039 1754 ntBASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
CHD1LQ86WJ1 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 AC027601.5-201ENST00000624065 2482 ntBASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 TPT1P11-201ENST00000458482 498 ntBASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 AC133539.2-201ENST00000604757 467 ntBASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD1LQ86WJ1 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD1LQ86WJ1 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms