Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 GCSHP3-201ENST00000431120 391 ntBASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 PEBP1P2-201ENST00000603980 558 ntBASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC9.08□□□□□ -0.96
VPS13BQ7Z7G8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AL109809.1-201ENST00000418979 1367 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 TLE1P1-201ENST00000422965 589 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AC093826.1-201ENST00000508655 993 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AC007952.4-201ENST00000573866 637 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 RN7SL470P-201ENST00000583069 259 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AL139339.2-201ENST00000608063 657 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 R3HDM2P2-201ENST00000401880 2116 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 FTX-216ENST00000638985 1367 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AL583805.1-201ENST00000391389 531 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 HLA-DMA-203ENST00000395305 777 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 HNRNPA1P58-201ENST00000403629 610 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 CHCHD2P9-201ENST00000461726 456 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 MIR2392-201ENST00000584881 84 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AC011471.3-201ENST00000623576 402 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AC087481.3-201ENST00000602886 1894 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 ENPP7P8-202ENST00000527856 1345 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 HLA-DQB2-231ENST00000435145 2026 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AC004837.1-201ENST00000446267 564 ntBASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 BUD31-205ENST00000456893 512 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
VPS13BQ7Z7G8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms