Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 KLF2P2-201ENST00000416807 1039 ntBASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 AC119751.2-201ENST00000504529 210 ntBASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 AL359881.2-201ENST00000602973 570 ntBASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 AC244669.2-201ENST00000612320 853 ntBASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 MIR6805-201ENST00000615055 62 ntBASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFWD3Q6PCD5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 AC068587.6-202ENST00000641839 5619 ntBASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 CTBP2P5-201ENST00000454986 1264 ntBASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 AC007551.1-201ENST00000457394 519 ntBASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 KRT18P25-201ENST00000508931 1278 ntBASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 GNRHR2-203ENST00000581100 1187 ntBASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 KRT8P35-201ENST00000483942 1338 ntBASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFWD3Q6PCD5 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms