Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC62Q6P9F0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC62Q6P9F0 MIR4683-201ENST00000579659 81 ntBASIC16.98■□□□□ 0.31
CCDC62Q6P9F0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC62Q6P9F0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC62Q6P9F0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC62Q6P9F0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC62Q6P9F0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC62Q6P9F0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC62Q6P9F0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC62Q6P9F0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AL359258.3-201ENST00000622910 2331 ntBASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 RN7SKP175-201ENST00000408472 289 ntBASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 SLC25A24P2-201ENST00000415059 510 ntBASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AC016700.1-201ENST00000429424 312 ntBASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 IGHJ2P-201ENST00000454480 60 ntBASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AC044849.1-201ENST00000519737 1188 ntBASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AL021578.1-201ENST00000613646 709 ntBASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AC022748.3-201ENST00000621828 275 ntBASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AC012508.2-201ENST00000567613 1472 ntBASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 MIR600HG-201ENST00000449175 5984 ntBASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 AC020658.6-201ENST00000623564 1870 ntBASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 INE2-201ENST00000630399 1874 ntBASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC62Q6P9F0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 MIR4783-201ENST00000580343 82 ntBASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 AL358472.3-201ENST00000608147 415 ntBASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC62Q6P9F0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms