Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC17.07■□□□□ 0.32
HTRA3P83110 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC17.07■□□□□ 0.32
HTRA3P83110 KRT8P1-201ENST00000557533 1207 ntBASIC17.07■□□□□ 0.32
HTRA3P83110 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC17.07■□□□□ 0.32
HTRA3P83110 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC17.07■□□□□ 0.32
HTRA3P83110 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.07■□□□□ 0.32
HTRA3P83110 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HTRA3P83110 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HTRA3P83110 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA3P83110 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HTRA3P83110 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA3P83110 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA3P83110 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA3P83110 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA3P83110 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
HTRA3P83110 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.06■□□□□ 0.32
HTRA3P83110 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.06■□□□□ 0.32
HTRA3P83110 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.06■□□□□ 0.32
HTRA3P83110 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC17.06■□□□□ 0.32
HTRA3P83110 HNRNPA1P25-201ENST00000422644 937 ntBASIC17.06■□□□□ 0.32
HTRA3P83110 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC17.06■□□□□ 0.32
HTRA3P83110 AC025594.1-201ENST00000469533 543 ntBASIC17.06■□□□□ 0.32
HTRA3P83110 AC025186.1-201ENST00000478174 870 ntBASIC17.06■□□□□ 0.32
HTRA3P83110 AC147876.1-201ENST00000504408 322 ntBASIC17.06■□□□□ 0.32
HTRA3P83110 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HTRA3P83110 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC17.06■□□□□ 0.32
HTRA3P83110 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC17.06■□□□□ 0.32
HTRA3P83110 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.06■□□□□ 0.32
HTRA3P83110 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.06■□□□□ 0.32
HTRA3P83110 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.06■□□□□ 0.32
HTRA3P83110 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.06■□□□□ 0.32
HTRA3P83110 AP003680.1-201ENST00000598970 3660 ntBASIC17.06■□□□□ 0.32
HTRA3P83110 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.06■□□□□ 0.32
HTRA3P83110 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HTRA3P83110 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
HTRA3P83110 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTRA3P83110 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.05■□□□□ 0.32
HTRA3P83110 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HTRA3P83110 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
HTRA3P83110 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HTRA3P83110 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HTRA3P83110 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC17.05■□□□□ 0.32
HTRA3P83110 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HTRA3P83110 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC17.05■□□□□ 0.32
HTRA3P83110 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC17.05■□□□□ 0.32
HTRA3P83110 IGHV1-12-201ENST00000518307 205 ntBASIC17.05■□□□□ 0.32
HTRA3P83110 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HTRA3P83110 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC17.05■□□□□ 0.32
HTRA3P83110 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HTRA3P83110 VENTXP3-201ENST00000546480 773 ntBASIC17.05■□□□□ 0.32
HTRA3P83110 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC17.05■□□□□ 0.32
HTRA3P83110 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.05■□□□□ 0.32
HTRA3P83110 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC17.05■□□□□ 0.32
HTRA3P83110 BMF-206ENST00000558774 671 ntTSL 3 BASIC17.05■□□□□ 0.32
HTRA3P83110 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HTRA3P83110 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC17.05■□□□□ 0.32
HTRA3P83110 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC17.05■□□□□ 0.32
HTRA3P83110 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 OR3A1-202ENST00000615105 966 ntBASIC17.05■□□□□ 0.32
HTRA3P83110 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.05■□□□□ 0.32
HTRA3P83110 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC17.05■□□□□ 0.32
HTRA3P83110 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC17.05■□□□□ 0.32
HTRA3P83110 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTRA3P83110 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms