Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TPM4P67936 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 AC010327.5-201ENST00000586923 3061 ntBASIC17.06■□□□□ 0.32
TPM4P67936 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM4P67936 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TPM4P67936 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM4P67936 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM4P67936 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.05■□□□□ 0.32
TPM4P67936 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TPM4P67936 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TPM4P67936 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM4P67936 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM4P67936 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM4P67936 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM4P67936 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM4P67936 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 AL035456.1-201ENST00000456064 1369 ntBASIC17.05■□□□□ 0.32
TPM4P67936 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
TPM4P67936 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.05■□□□□ 0.32
TPM4P67936 AP001267.2-201ENST00000532619 2086 ntBASIC17.05■□□□□ 0.32
TPM4P67936 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM4P67936 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.05■□□□□ 0.32
TPM4P67936 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
TPM4P67936 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.05■□□□□ 0.32
TPM4P67936 BANF1P1-201ENST00000553684 263 ntBASIC17.05■□□□□ 0.32
TPM4P67936 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TPM4P67936 MIR6069-201ENST00000620069 79 ntBASIC17.05■□□□□ 0.32
TPM4P67936 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM4P67936 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC17.05■□□□□ 0.32
TPM4P67936 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TPM4P67936 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC17.05■□□□□ 0.32
TPM4P67936 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC17.05■□□□□ 0.32
TPM4P67936 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TPM4P67936 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TPM4P67936 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
TPM4P67936 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM4P67936 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TPM4P67936 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM4P67936 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM4P67936 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TPM4P67936 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TPM4P67936 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.04■□□□□ 0.32
TPM4P67936 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.04■□□□□ 0.32
TPM4P67936 TPT1P11-201ENST00000458482 498 ntBASIC17.04■□□□□ 0.32
TPM4P67936 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.04■□□□□ 0.32
TPM4P67936 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TPM4P67936 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM4P67936 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.04■□□□□ 0.32
TPM4P67936 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM4P67936 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TPM4P67936 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM4P67936 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TPM4P67936 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM4P67936 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TPM4P67936 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 AC055811.4-201ENST00000624039 1754 ntBASIC17.04■□□□□ 0.32
TPM4P67936 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TPM4P67936 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
TPM4P67936 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TPM4P67936 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM4P67936 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms