Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.77□□□□□ -0.05
YBX1P67809 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.77□□□□□ -0.05
YBX1P67809 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.77□□□□□ -0.05
YBX1P67809 AL645728.2-202ENST00000641679 227 ntBASIC14.77□□□□□ -0.05
YBX1P67809 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
YBX1P67809 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
YBX1P67809 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
YBX1P67809 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
YBX1P67809 INTS4P1-203ENST00000641008 3683 ntBASIC14.77□□□□□ -0.05
YBX1P67809 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
YBX1P67809 AL928921.2-201ENST00000641325 2442 ntBASIC14.77□□□□□ -0.05
YBX1P67809 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
YBX1P67809 GRK6P1-201ENST00000400595 1711 ntBASIC14.77□□□□□ -0.05
YBX1P67809 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.77□□□□□ -0.05
YBX1P67809 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.77□□□□□ -0.05
YBX1P67809 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.77□□□□□ -0.05
YBX1P67809 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.77□□□□□ -0.05
YBX1P67809 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
YBX1P67809 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
YBX1P67809 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.77□□□□□ -0.05
YBX1P67809 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
YBX1P67809 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.77□□□□□ -0.05
YBX1P67809 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
YBX1P67809 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
YBX1P67809 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
YBX1P67809 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
YBX1P67809 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.76□□□□□ -0.05
YBX1P67809 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
YBX1P67809 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 RNU1-114P-201ENST00000365297 166 ntBASIC14.76□□□□□ -0.05
YBX1P67809 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
YBX1P67809 AC005034.1-201ENST00000426657 489 ntBASIC14.76□□□□□ -0.05
YBX1P67809 AL162726.2-201ENST00000438986 1017 ntBASIC14.76□□□□□ -0.05
YBX1P67809 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.76□□□□□ -0.05
YBX1P67809 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.76□□□□□ -0.05
YBX1P67809 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.76□□□□□ -0.05
YBX1P67809 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
YBX1P67809 MIR5189-201ENST00000577370 114 ntBASIC14.76□□□□□ -0.05
YBX1P67809 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.76□□□□□ -0.05
YBX1P67809 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
YBX1P67809 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.76□□□□□ -0.05
YBX1P67809 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.76□□□□□ -0.05
YBX1P67809 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.76□□□□□ -0.05
YBX1P67809 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
YBX1P67809 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
YBX1P67809 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.76□□□□□ -0.05
YBX1P67809 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 AC006504.5-208ENST00000588784 2401 ntBASIC14.76□□□□□ -0.05
YBX1P67809 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.76□□□□□ -0.05
YBX1P67809 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
YBX1P67809 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.76□□□□□ -0.05
YBX1P67809 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.76□□□□□ -0.05
YBX1P67809 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
YBX1P67809 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.76□□□□□ -0.05
YBX1P67809 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YBX1P67809 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
YBX1P67809 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
YBX1P67809 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
YBX1P67809 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
YBX1P67809 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
YBX1P67809 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.75□□□□□ -0.05
YBX1P67809 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
YBX1P67809 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
YBX1P67809 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
YBX1P67809 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
YBX1P67809 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
YBX1P67809 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
YBX1P67809 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
YBX1P67809 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
YBX1P67809 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
YBX1P67809 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
YBX1P67809 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
YBX1P67809 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
YBX1P67809 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.75□□□□□ -0.05
YBX1P67809 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.75□□□□□ -0.05
YBX1P67809 HLA-K-203ENST00000430151 1046 ntBASIC14.75□□□□□ -0.05
YBX1P67809 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.75□□□□□ -0.05
YBX1P67809 AC004066.1-201ENST00000502488 802 ntBASIC14.75□□□□□ -0.05
YBX1P67809 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
YBX1P67809 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.75□□□□□ -0.05
YBX1P67809 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.75□□□□□ -0.05
YBX1P67809 AC008735.3-201ENST00000596646 500 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms