Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCR4P61073 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CXCR4P61073 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.85□□□□□ -0.19
CXCR4P61073 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CXCR4P61073 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CXCR4P61073 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCR4P61073 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 COL6A4P2-202ENST00000504443 2753 ntBASIC13.84□□□□□ -0.19
CXCR4P61073 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCR4P61073 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCR4P61073 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CXCR4P61073 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CXCR4P61073 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CXCR4P61073 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.84□□□□□ -0.19
CXCR4P61073 ACTG1P14-201ENST00000446382 1122 ntBASIC13.84□□□□□ -0.19
CXCR4P61073 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 AC084121.4-201ENST00000641598 221 ntBASIC13.84□□□□□ -0.19
CXCR4P61073 AF228730.8-201ENST00000642140 221 ntBASIC13.84□□□□□ -0.19
CXCR4P61073 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCR4P61073 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCR4P61073 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCR4P61073 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCR4P61073 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CXCR4P61073 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CXCR4P61073 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.83□□□□□ -0.19
CXCR4P61073 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CXCR4P61073 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CXCR4P61073 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CXCR4P61073 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CXCR4P61073 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CXCR4P61073 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 AC073548.1-201ENST00000624088 1882 ntBASIC13.83□□□□□ -0.2
CXCR4P61073 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CXCR4P61073 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 AL133267.1-201ENST00000398220 340 ntBASIC13.83□□□□□ -0.2
CXCR4P61073 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 AL353705.2-201ENST00000428243 662 ntBASIC13.83□□□□□ -0.2
CXCR4P61073 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.83□□□□□ -0.2
CXCR4P61073 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCR4P61073 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCR4P61073 AC040169.1-201ENST00000565382 521 ntBASIC13.83□□□□□ -0.2
CXCR4P61073 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CXCR4P61073 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CXCR4P61073 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCR4P61073 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CXCR4P61073 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CXCR4P61073 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCR4P61073 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms