Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.07□□□□□ -0.32
AP3S2P59780 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.07□□□□□ -0.32
AP3S2P59780 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S2P59780 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S2P59780 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
AP3S2P59780 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
AP3S2P59780 RNA5SP410-201ENST00000516285 106 ntBASIC13.07□□□□□ -0.32
AP3S2P59780 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S2P59780 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.07□□□□□ -0.32
AP3S2P59780 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.07□□□□□ -0.32
AP3S2P59780 AL645728.2-202ENST00000641679 227 ntBASIC13.07□□□□□ -0.32
AP3S2P59780 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S2P59780 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S2P59780 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S2P59780 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S2P59780 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S2P59780 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S2P59780 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
AP3S2P59780 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
AP3S2P59780 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S2P59780 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.06□□□□□ -0.32
AP3S2P59780 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
AP3S2P59780 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S2P59780 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.06□□□□□ -0.32
AP3S2P59780 ATP5G2P1-201ENST00000433580 426 ntBASIC13.06□□□□□ -0.32
AP3S2P59780 RPS2P1-201ENST00000434010 821 ntBASIC13.06□□□□□ -0.32
AP3S2P59780 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
AP3S2P59780 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
AP3S2P59780 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.06□□□□□ -0.32
AP3S2P59780 AC073648.2-201ENST00000510116 352 ntBASIC13.06□□□□□ -0.32
AP3S2P59780 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
AP3S2P59780 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
AP3S2P59780 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
AP3S2P59780 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S2P59780 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S2P59780 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
AP3S2P59780 AL121772.3-201ENST00000610840 674 ntBASIC13.06□□□□□ -0.32
AP3S2P59780 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.06□□□□□ -0.32
AP3S2P59780 AL031008.1-201ENST00000619963 541 ntBASIC13.06□□□□□ -0.32
AP3S2P59780 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
AP3S2P59780 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
AP3S2P59780 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S2P59780 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.06□□□□□ -0.32
AP3S2P59780 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S2P59780 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
AP3S2P59780 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
AP3S2P59780 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S2P59780 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
AP3S2P59780 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
AP3S2P59780 AC073548.1-201ENST00000624088 1882 ntBASIC13.06□□□□□ -0.32
AP3S2P59780 INE2-201ENST00000630399 1874 ntBASIC13.06□□□□□ -0.32
AP3S2P59780 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S2P59780 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.06□□□□□ -0.32
AP3S2P59780 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S2P59780 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S2P59780 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
AP3S2P59780 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
AP3S2P59780 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
AP3S2P59780 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S2P59780 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
AP3S2P59780 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S2P59780 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
AP3S2P59780 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.05□□□□□ -0.32
AP3S2P59780 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.05□□□□□ -0.32
AP3S2P59780 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms