Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
DEFA1P59665 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.31□□□□□ -0.28
DEFA1P59665 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.31□□□□□ -0.28
DEFA1P59665 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.31□□□□□ -0.28
DEFA1P59665 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.31□□□□□ -0.28
DEFA1P59665 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 RCN1P2-201ENST00000398357 915 ntBASIC13.31□□□□□ -0.28
DEFA1P59665 PTCHD3P3-201ENST00000403073 906 ntBASIC13.31□□□□□ -0.28
DEFA1P59665 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.31□□□□□ -0.28
DEFA1P59665 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
DEFA1P59665 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.31□□□□□ -0.28
DEFA1P59665 MINOS1P3-201ENST00000457048 203 ntBASIC13.31□□□□□ -0.28
DEFA1P59665 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
DEFA1P59665 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.31□□□□□ -0.28
DEFA1P59665 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.31□□□□□ -0.28
DEFA1P59665 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.31□□□□□ -0.28
DEFA1P59665 GGTLC5P-201ENST00000617623 998 ntBASIC13.31□□□□□ -0.28
DEFA1P59665 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.31□□□□□ -0.28
DEFA1P59665 TMEM191A-211ENST00000637163 1067 ntBASIC13.31□□□□□ -0.28
DEFA1P59665 AL022326.1-202ENST00000641533 845 ntBASIC13.31□□□□□ -0.28
DEFA1P59665 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.31□□□□□ -0.28
DEFA1P59665 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
DEFA1P59665 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.31□□□□□ -0.28
DEFA1P59665 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.31□□□□□ -0.28
DEFA1P59665 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.31□□□□□ -0.28
DEFA1P59665 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.31□□□□□ -0.28
DEFA1P59665 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA1P59665 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.3□□□□□ -0.28
DEFA1P59665 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.3□□□□□ -0.28
DEFA1P59665 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA1P59665 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.3□□□□□ -0.28
DEFA1P59665 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA1P59665 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
DEFA1P59665 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
DEFA1P59665 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA1P59665 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
DEFA1P59665 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA1P59665 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.3□□□□□ -0.28
DEFA1P59665 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.3□□□□□ -0.28
DEFA1P59665 AC091607.1-201ENST00000490318 1060 ntBASIC13.3□□□□□ -0.28
DEFA1P59665 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.3□□□□□ -0.28
DEFA1P59665 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.3□□□□□ -0.28
DEFA1P59665 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.3□□□□□ -0.28
DEFA1P59665 AC002347.1-201ENST00000569543 541 ntBASIC13.3□□□□□ -0.28
DEFA1P59665 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
DEFA1P59665 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
DEFA1P59665 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC13.3□□□□□ -0.28
DEFA1P59665 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA1P59665 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA1P59665 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA1P59665 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
DEFA1P59665 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
DEFA1P59665 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA1P59665 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA1P59665 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
DEFA1P59665 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA1P59665 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA1P59665 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA1P59665 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA1P59665 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DEFA1P59665 AC011481.3-201ENST00000623895 5594 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms