Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 MSTO2P-201ENST00000314835 1709 ntBASIC15.31■□□□□ 0.04
WNT3AP56704 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 AC055811.4-201ENST00000624039 1754 ntBASIC15.31■□□□□ 0.04
WNT3AP56704 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT3AP56704 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.31■□□□□ 0.04
WNT3AP56704 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT3AP56704 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.3■□□□□ 0.04
WNT3AP56704 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
WNT3AP56704 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
WNT3AP56704 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
WNT3AP56704 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.3■□□□□ 0.04
WNT3AP56704 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 ACTG1P3-201ENST00000431775 1114 ntBASIC15.3■□□□□ 0.04
WNT3AP56704 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
WNT3AP56704 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.3■□□□□ 0.04
WNT3AP56704 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.3■□□□□ 0.04
WNT3AP56704 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.3■□□□□ 0.04
WNT3AP56704 RN7SL752P-201ENST00000463779 287 ntBASIC15.3■□□□□ 0.04
WNT3AP56704 KRT8P35-201ENST00000483942 1338 ntBASIC15.3■□□□□ 0.04
WNT3AP56704 GIMAP3P-201ENST00000495150 836 ntBASIC15.3■□□□□ 0.04
WNT3AP56704 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.3■□□□□ 0.04
WNT3AP56704 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
WNT3AP56704 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.3■□□□□ 0.04
WNT3AP56704 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.3■□□□□ 0.04
WNT3AP56704 MTHFR-210ENST00000641407 2387 ntBASIC15.3■□□□□ 0.04
WNT3AP56704 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
WNT3AP56704 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
WNT3AP56704 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.3■□□□□ 0.04
WNT3AP56704 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT3AP56704 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.29■□□□□ 0.04
WNT3AP56704 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.29■□□□□ 0.04
WNT3AP56704 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
WNT3AP56704 AC068418.2-201ENST00000577309 3703 ntBASIC15.29■□□□□ 0.04
WNT3AP56704 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
WNT3AP56704 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.29■□□□□ 0.04
WNT3AP56704 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
WNT3AP56704 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
WNT3AP56704 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
WNT3AP56704 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.29■□□□□ 0.04
WNT3AP56704 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.29■□□□□ 0.04
WNT3AP56704 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.29■□□□□ 0.04
WNT3AP56704 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.29■□□□□ 0.04
WNT3AP56704 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 MIR5189-201ENST00000577370 114 ntBASIC15.29■□□□□ 0.04
WNT3AP56704 AC010319.3-201ENST00000597028 470 ntBASIC15.29■□□□□ 0.04
WNT3AP56704 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
WNT3AP56704 AL603764.1-201ENST00000636452 321 ntBASIC15.29■□□□□ 0.04
WNT3AP56704 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.29■□□□□ 0.04
WNT3AP56704 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.29■□□□□ 0.04
WNT3AP56704 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.29■□□□□ 0.04
WNT3AP56704 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
WNT3AP56704 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.29■□□□□ 0.04
WNT3AP56704 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
WNT3AP56704 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
WNT3AP56704 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
WNT3AP56704 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WNT3AP56704 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.29■□□□□ 0.04
WNT3AP56704 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
WNT3AP56704 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
WNT3AP56704 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms