Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PER3P56645 GPAA1P2-201ENST00000417923 928 ntBASIC14.14□□□□□ -0.15
PER3P56645 KRT8P13-201ENST00000463294 1010 ntBASIC14.14□□□□□ -0.15
PER3P56645 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.14□□□□□ -0.15
PER3P56645 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.14□□□□□ -0.15
PER3P56645 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 MIR3615-201ENST00000581999 87 ntBASIC14.14□□□□□ -0.15
PER3P56645 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 BRI3BPP1-201ENST00000594224 787 ntBASIC14.14□□□□□ -0.15
PER3P56645 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
PER3P56645 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 RPSAP52-203ENST00000622976 1023 ntBASIC14.14□□□□□ -0.15
PER3P56645 AL158212.4-201ENST00000624062 1286 ntBASIC14.14□□□□□ -0.15
PER3P56645 AC005252.3-201ENST00000623855 2258 ntBASIC14.14□□□□□ -0.15
PER3P56645 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 AC134407.2-201ENST00000625089 1978 ntBASIC14.14□□□□□ -0.15
PER3P56645 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.14□□□□□ -0.15
PER3P56645 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.14□□□□□ -0.15
PER3P56645 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.13□□□□□ -0.15
PER3P56645 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.13□□□□□ -0.15
PER3P56645 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PER3P56645 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PER3P56645 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.13□□□□□ -0.15
PER3P56645 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PER3P56645 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.13□□□□□ -0.15
PER3P56645 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.13□□□□□ -0.15
PER3P56645 ELK2AP-201ENST00000392510 1007 ntBASIC14.13□□□□□ -0.15
PER3P56645 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.13□□□□□ -0.15
PER3P56645 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.13□□□□□ -0.15
PER3P56645 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.13□□□□□ -0.15
PER3P56645 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.13□□□□□ -0.15
PER3P56645 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.13□□□□□ -0.15
PER3P56645 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.13□□□□□ -0.15
PER3P56645 AP001889.1-201ENST00000525414 633 ntBASIC14.13□□□□□ -0.15
PER3P56645 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 AL359711.2-201ENST00000563105 872 ntBASIC14.13□□□□□ -0.15
PER3P56645 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.13□□□□□ -0.15
PER3P56645 AC091271.1-201ENST00000611877 1162 ntBASIC14.13□□□□□ -0.15
PER3P56645 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.13□□□□□ -0.15
PER3P56645 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.13□□□□□ -0.15
PER3P56645 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.13□□□□□ -0.15
PER3P56645 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PER3P56645 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.13□□□□□ -0.15
PER3P56645 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.13□□□□□ -0.15
PER3P56645 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.13□□□□□ -0.15
PER3P56645 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PER3P56645 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.12□□□□□ -0.15
PER3P56645 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PER3P56645 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 INTS4P2-202ENST00000614726 2019 ntBASIC14.12□□□□□ -0.15
PER3P56645 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms