Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 WASH3P-207ENST00000560956 1394 ntBASIC11.1□□□□□ -0.63
APOC4P55056 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 PEG13-201ENST00000631594 5667 ntBASIC11.1□□□□□ -0.63
APOC4P55056 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.1□□□□□ -0.63
APOC4P55056 CICP11-201ENST00000434745 2827 ntBASIC11.1□□□□□ -0.63
APOC4P55056 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.1□□□□□ -0.63
APOC4P55056 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
APOC4P55056 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.1□□□□□ -0.63
APOC4P55056 AC009090.5-201ENST00000624886 2285 ntBASIC11.1□□□□□ -0.63
APOC4P55056 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.1□□□□□ -0.63
APOC4P55056 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
APOC4P55056 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 AC126365.1-201ENST00000578585 1514 ntBASIC11.09□□□□□ -0.63
APOC4P55056 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 EIF3FP3-201ENST00000434851 1086 ntBASIC11.09□□□□□ -0.63
APOC4P55056 ACTBP11-201ENST00000436287 1126 ntBASIC11.09□□□□□ -0.63
APOC4P55056 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 COX5BP1-201ENST00000507622 393 ntBASIC11.09□□□□□ -0.63
APOC4P55056 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 RIT1-205ENST00000539040 919 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 EEF1DP1-201ENST00000585891 896 ntBASIC11.09□□□□□ -0.63
APOC4P55056 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
APOC4P55056 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 REXO1L6P-201ENST00000603433 1515 ntBASIC11.09□□□□□ -0.63
APOC4P55056 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.09□□□□□ -0.63
APOC4P55056 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
APOC4P55056 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.09□□□□□ -0.63
APOC4P55056 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
APOC4P55056 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
APOC4P55056 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms