Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
ATP1B3P54709 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
ATP1B3P54709 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
ATP1B3P54709 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
ATP1B3P54709 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.23□□□□□ -0.29
ATP1B3P54709 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.23□□□□□ -0.29
ATP1B3P54709 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.23□□□□□ -0.29
ATP1B3P54709 KLF2P3-201ENST00000451977 1087 ntBASIC13.23□□□□□ -0.29
ATP1B3P54709 AC067863.1-201ENST00000494933 530 ntBASIC13.23□□□□□ -0.29
ATP1B3P54709 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.23□□□□□ -0.29
ATP1B3P54709 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.23□□□□□ -0.29
ATP1B3P54709 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.23□□□□□ -0.29
ATP1B3P54709 AC027369.6-201ENST00000525520 931 ntBASIC13.23□□□□□ -0.29
ATP1B3P54709 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.23□□□□□ -0.29
ATP1B3P54709 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ATP1B3P54709 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.23□□□□□ -0.29
ATP1B3P54709 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.23□□□□□ -0.29
ATP1B3P54709 LINC01115-203ENST00000606068 577 ntBASIC13.23□□□□□ -0.29
ATP1B3P54709 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.23□□□□□ -0.29
ATP1B3P54709 AL109936.8-201ENST00000641772 604 ntBASIC13.23□□□□□ -0.29
ATP1B3P54709 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 REXO1L2P-201ENST00000425429 2069 ntBASIC13.23□□□□□ -0.29
ATP1B3P54709 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ATP1B3P54709 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ATP1B3P54709 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.23□□□□□ -0.29
ATP1B3P54709 C8orf49-201ENST00000525043 1968 ntBASIC13.23□□□□□ -0.29
ATP1B3P54709 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
ATP1B3P54709 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
ATP1B3P54709 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.23□□□□□ -0.29
ATP1B3P54709 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.23□□□□□ -0.29
ATP1B3P54709 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATP1B3P54709 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.23□□□□□ -0.29
ATP1B3P54709 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
ATP1B3P54709 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.22□□□□□ -0.29
ATP1B3P54709 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ATP1B3P54709 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
ATP1B3P54709 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ATP1B3P54709 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.22□□□□□ -0.29
ATP1B3P54709 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.22□□□□□ -0.29
ATP1B3P54709 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.22□□□□□ -0.29
ATP1B3P54709 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.22□□□□□ -0.29
ATP1B3P54709 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.22□□□□□ -0.29
ATP1B3P54709 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.22□□□□□ -0.29
ATP1B3P54709 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.22□□□□□ -0.29
ATP1B3P54709 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.22□□□□□ -0.29
ATP1B3P54709 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.22□□□□□ -0.29
ATP1B3P54709 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 TIMM17BP1-201ENST00000545713 516 ntBASIC13.22□□□□□ -0.29
ATP1B3P54709 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ATP1B3P54709 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
ATP1B3P54709 AC010336.2-201ENST00000564226 506 ntBASIC13.22□□□□□ -0.29
ATP1B3P54709 AC140878.1-201ENST00000565277 250 ntBASIC13.22□□□□□ -0.29
ATP1B3P54709 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.22□□□□□ -0.29
ATP1B3P54709 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
ATP1B3P54709 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ATP1B3P54709 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.22□□□□□ -0.29
ATP1B3P54709 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ATP1B3P54709 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
ATP1B3P54709 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.22□□□□□ -0.29
ATP1B3P54709 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
ATP1B3P54709 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
ATP1B3P54709 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATP1B3P54709 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms