Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AL160314.3-201ENST00000556041 767 ntBASIC15.82■□□□□ 0.12
CLCN4P51793 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.82■□□□□ 0.12
CLCN4P51793 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.82■□□□□ 0.12
CLCN4P51793 SNORD3B-2-202ENST00000571722 791 ntBASIC15.82■□□□□ 0.12
CLCN4P51793 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.82■□□□□ 0.12
CLCN4P51793 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLCN4P51793 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLCN4P51793 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLCN4P51793 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLCN4P51793 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCN4P51793 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCN4P51793 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.81■□□□□ 0.12
CLCN4P51793 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.81■□□□□ 0.12
CLCN4P51793 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLCN4P51793 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCN4P51793 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCN4P51793 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.81■□□□□ 0.12
CLCN4P51793 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.81■□□□□ 0.12
CLCN4P51793 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLCN4P51793 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CLCN4P51793 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.81■□□□□ 0.12
CLCN4P51793 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.81■□□□□ 0.12
CLCN4P51793 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.81■□□□□ 0.12
CLCN4P51793 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLCN4P51793 U62317.3-201ENST00000608319 855 ntBASIC15.81■□□□□ 0.12
CLCN4P51793 AL353770.1-201ENST00000614915 403 ntBASIC15.81■□□□□ 0.12
CLCN4P51793 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.81■□□□□ 0.12
CLCN4P51793 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLCN4P51793 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCN4P51793 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCN4P51793 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLCN4P51793 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN4P51793 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN4P51793 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCN4P51793 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN4P51793 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLCN4P51793 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 RN7SKP214-201ENST00000364208 315 ntBASIC15.8■□□□□ 0.12
CLCN4P51793 RN7SKP230-201ENST00000365642 335 ntBASIC15.8■□□□□ 0.12
CLCN4P51793 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN4P51793 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCN4P51793 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN4P51793 AC234782.1-201ENST00000451950 919 ntBASIC15.8■□□□□ 0.12
CLCN4P51793 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CLCN4P51793 AC103988.2-201ENST00000561804 725 ntBASIC15.8■□□□□ 0.12
CLCN4P51793 MIR5572-201ENST00000583188 137 ntBASIC15.8■□□□□ 0.12
CLCN4P51793 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCN4P51793 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCN4P51793 AL132994.2-201ENST00000603120 687 ntBASIC15.8■□□□□ 0.12
CLCN4P51793 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCN4P51793 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CLCN4P51793 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCN4P51793 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 AL513477.1-201ENST00000602865 2407 ntBASIC15.8■□□□□ 0.12
CLCN4P51793 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCN4P51793 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms