Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AGAP7P-201ENST00000582299 2062 ntBASIC16.68■□□□□ 0.26
GPC3P51654 AGAP14-201ENST00000624701 2060 ntBASIC16.68■□□□□ 0.26
GPC3P51654 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.68■□□□□ 0.26
GPC3P51654 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.68■□□□□ 0.26
GPC3P51654 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.68■□□□□ 0.26
GPC3P51654 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
GPC3P51654 BTBD6P1-201ENST00000412176 1267 ntBASIC16.68■□□□□ 0.26
GPC3P51654 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.68■□□□□ 0.26
GPC3P51654 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.68■□□□□ 0.26
GPC3P51654 RPSAP36-202ENST00000494591 1261 ntBASIC16.68■□□□□ 0.26
GPC3P51654 AC026434.2-201ENST00000506094 1078 ntBASIC16.68■□□□□ 0.26
GPC3P51654 COX5BP1-201ENST00000507622 393 ntBASIC16.68■□□□□ 0.26
GPC3P51654 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.68■□□□□ 0.26
GPC3P51654 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.68■□□□□ 0.26
GPC3P51654 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
GPC3P51654 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.68■□□□□ 0.26
GPC3P51654 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 OR10B1P-201ENST00000601666 907 ntBASIC16.68■□□□□ 0.26
GPC3P51654 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.68■□□□□ 0.26
GPC3P51654 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.68■□□□□ 0.26
GPC3P51654 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.68■□□□□ 0.26
GPC3P51654 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.68■□□□□ 0.26
GPC3P51654 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.68■□□□□ 0.26
GPC3P51654 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GPC3P51654 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GPC3P51654 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 AL359258.3-201ENST00000622910 2331 ntBASIC16.68■□□□□ 0.26
GPC3P51654 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.68■□□□□ 0.26
GPC3P51654 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GPC3P51654 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GPC3P51654 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.68■□□□□ 0.26
GPC3P51654 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
GPC3P51654 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
GPC3P51654 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
GPC3P51654 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.67■□□□□ 0.26
GPC3P51654 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
GPC3P51654 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.67■□□□□ 0.26
GPC3P51654 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.67■□□□□ 0.26
GPC3P51654 WASH3P-207ENST00000560956 1394 ntBASIC16.67■□□□□ 0.26
GPC3P51654 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 AC015818.8-201ENST00000587907 1519 ntBASIC16.67■□□□□ 0.26
GPC3P51654 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
GPC3P51654 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.67■□□□□ 0.26
GPC3P51654 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.67■□□□□ 0.26
GPC3P51654 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GPC3P51654 AC007969.1-201ENST00000433675 447 ntBASIC16.67■□□□□ 0.26
GPC3P51654 MTX1P1-201ENST00000440904 838 ntBASIC16.67■□□□□ 0.26
GPC3P51654 AL591846.1-201ENST00000451736 433 ntBASIC16.67■□□□□ 0.26
GPC3P51654 AL391280.1-201ENST00000506969 1062 ntBASIC16.67■□□□□ 0.26
GPC3P51654 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.67■□□□□ 0.26
GPC3P51654 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
GPC3P51654 AC106820.3-201ENST00000561653 397 ntBASIC16.67■□□□□ 0.26
GPC3P51654 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.67■□□□□ 0.26
GPC3P51654 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
GPC3P51654 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
GPC3P51654 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
GPC3P51654 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 CLUHP2-201ENST00000426660 1303 ntBASIC16.67■□□□□ 0.26
GPC3P51654 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC3P51654 AC012508.2-201ENST00000567613 1472 ntBASIC16.67■□□□□ 0.26
GPC3P51654 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
GPC3P51654 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.67■□□□□ 0.26
GPC3P51654 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.66■□□□□ 0.26
GPC3P51654 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPC3P51654 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.66■□□□□ 0.26
GPC3P51654 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms