Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.76■□□□□ 0.43
NEDD4P46934 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
NEDD4P46934 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.76■□□□□ 0.43
NEDD4P46934 AC009093.2-202ENST00000620513 2079 ntBASIC17.76■□□□□ 0.43
NEDD4P46934 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NEDD4P46934 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.76■□□□□ 0.43
NEDD4P46934 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.76■□□□□ 0.43
NEDD4P46934 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NEDD4P46934 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 AC020910.5-201ENST00000623668 1865 ntBASIC17.76■□□□□ 0.43
NEDD4P46934 AC003102.2-201ENST00000589195 1469 ntBASIC17.76■□□□□ 0.43
NEDD4P46934 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.76■□□□□ 0.43
NEDD4P46934 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.76■□□□□ 0.43
NEDD4P46934 AL354989.2-201ENST00000435838 1540 ntBASIC17.76■□□□□ 0.43
NEDD4P46934 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.75■□□□□ 0.43
NEDD4P46934 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NEDD4P46934 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.75■□□□□ 0.43
NEDD4P46934 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.75■□□□□ 0.43
NEDD4P46934 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.75■□□□□ 0.43
NEDD4P46934 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.75■□□□□ 0.43
NEDD4P46934 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.75■□□□□ 0.43
NEDD4P46934 AC133552.6-201ENST00000613406 534 ntBASIC17.75■□□□□ 0.43
NEDD4P46934 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 CICP14-201ENST00000629111 2732 ntBASIC17.75■□□□□ 0.43
NEDD4P46934 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.75■□□□□ 0.43
NEDD4P46934 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.75■□□□□ 0.43
NEDD4P46934 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
NEDD4P46934 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NEDD4P46934 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
NEDD4P46934 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.75■□□□□ 0.43
NEDD4P46934 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.75■□□□□ 0.43
NEDD4P46934 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.75■□□□□ 0.43
NEDD4P46934 AC013726.1-201ENST00000563747 2285 ntBASIC17.75■□□□□ 0.43
NEDD4P46934 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.75■□□□□ 0.43
NEDD4P46934 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NEDD4P46934 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NEDD4P46934 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NEDD4P46934 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.75■□□□□ 0.43
NEDD4P46934 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.75■□□□□ 0.43
NEDD4P46934 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NEDD4P46934 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.74■□□□□ 0.43
NEDD4P46934 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.74■□□□□ 0.43
NEDD4P46934 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.74■□□□□ 0.43
NEDD4P46934 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.74■□□□□ 0.43
NEDD4P46934 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 AC073413.1-201ENST00000603927 732 ntBASIC17.74■□□□□ 0.43
NEDD4P46934 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NEDD4P46934 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.74■□□□□ 0.43
NEDD4P46934 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 AL138725.1-201ENST00000407347 1314 ntBASIC17.74■□□□□ 0.43
NEDD4P46934 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.74■□□□□ 0.43
NEDD4P46934 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.74■□□□□ 0.43
NEDD4P46934 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.74■□□□□ 0.43
NEDD4P46934 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NEDD4P46934 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NEDD4P46934 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms