Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.28□□□□□ -0.28
GDNFP39905 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 AC138969.2-201ENST00000532739 9932 ntBASIC13.28□□□□□ -0.28
GDNFP39905 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 COL6A4P2-202ENST00000504443 2753 ntBASIC13.28□□□□□ -0.28
GDNFP39905 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
GDNFP39905 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.28□□□□□ -0.28
GDNFP39905 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
GDNFP39905 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.28□□□□□ -0.28
GDNFP39905 HLA-H-201ENST00000383620 1096 ntBASIC13.28□□□□□ -0.28
GDNFP39905 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.28□□□□□ -0.28
GDNFP39905 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.28□□□□□ -0.28
GDNFP39905 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
GDNFP39905 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.28□□□□□ -0.28
GDNFP39905 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.28□□□□□ -0.28
GDNFP39905 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.28□□□□□ -0.28
GDNFP39905 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.28□□□□□ -0.28
GDNFP39905 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.28□□□□□ -0.28
GDNFP39905 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
GDNFP39905 AL596442.2-201ENST00000610240 980 ntBASIC13.28□□□□□ -0.28
GDNFP39905 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.28□□□□□ -0.28
GDNFP39905 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.28□□□□□ -0.28
GDNFP39905 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.28□□□□□ -0.28
GDNFP39905 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
GDNFP39905 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
GDNFP39905 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.28□□□□□ -0.28
GDNFP39905 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
GDNFP39905 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
GDNFP39905 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
GDNFP39905 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
GDNFP39905 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.28□□□□□ -0.28
GDNFP39905 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GDNFP39905 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
GDNFP39905 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.28□□□□□ -0.28
GDNFP39905 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
GDNFP39905 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.27□□□□□ -0.28
GDNFP39905 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GDNFP39905 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.28
GDNFP39905 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GDNFP39905 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.27□□□□□ -0.28
GDNFP39905 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GDNFP39905 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.27□□□□□ -0.28
GDNFP39905 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
GDNFP39905 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GDNFP39905 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GDNFP39905 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
GDNFP39905 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
GDNFP39905 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
GDNFP39905 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GDNFP39905 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
GDNFP39905 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
GDNFP39905 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GDNFP39905 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.27□□□□□ -0.29
GDNFP39905 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.27□□□□□ -0.29
GDNFP39905 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
GDNFP39905 GHSR-202ENST00000427970 912 ntBASIC13.27□□□□□ -0.29
GDNFP39905 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.27□□□□□ -0.29
GDNFP39905 AC004967.1-201ENST00000453589 447 ntBASIC13.27□□□□□ -0.29
GDNFP39905 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.27□□□□□ -0.29
GDNFP39905 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.27□□□□□ -0.29
GDNFP39905 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.27□□□□□ -0.29
GDNFP39905 ALG1L8P-201ENST00000533887 760 ntBASIC13.27□□□□□ -0.29
GDNFP39905 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
GDNFP39905 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GDNFP39905 RARRES2P9-201ENST00000565168 469 ntBASIC13.27□□□□□ -0.29
GDNFP39905 AC024267.1-201ENST00000582320 895 ntBASIC13.27□□□□□ -0.29
GDNFP39905 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.27□□□□□ -0.29
GDNFP39905 AC004835.2-201ENST00000603762 682 ntBASIC13.27□□□□□ -0.29
GDNFP39905 AC027612.4-201ENST00000605371 583 ntBASIC13.27□□□□□ -0.29
GDNFP39905 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GDNFP39905 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
GDNFP39905 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms