Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.02■□□□□ 0.16
CHKAP35790 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CHKAP35790 GAPDHP40-201ENST00000505218 1006 ntBASIC16.02■□□□□ 0.16
CHKAP35790 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CHKAP35790 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CHKAP35790 CLUHP6-201ENST00000580789 941 ntBASIC16.02■□□□□ 0.16
CHKAP35790 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.02■□□□□ 0.16
CHKAP35790 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CHKAP35790 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHKAP35790 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CHKAP35790 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHKAP35790 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.02■□□□□ 0.15
CHKAP35790 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CHKAP35790 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHKAP35790 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHKAP35790 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CHKAP35790 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CHKAP35790 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.01■□□□□ 0.15
CHKAP35790 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.01■□□□□ 0.15
CHKAP35790 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CHKAP35790 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.01■□□□□ 0.15
CHKAP35790 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CHKAP35790 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CHKAP35790 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 AL355864.2-201ENST00000447420 863 ntBASIC16.01■□□□□ 0.15
CHKAP35790 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.01■□□□□ 0.15
CHKAP35790 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CHKAP35790 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.01■□□□□ 0.15
CHKAP35790 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CHKAP35790 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHKAP35790 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CHKAP35790 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHKAP35790 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.01■□□□□ 0.15
CHKAP35790 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 PCDHGB8P-201ENST00000502926 1973 ntBASIC16■□□□□ 0.15
CHKAP35790 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CHKAP35790 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CHKAP35790 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16■□□□□ 0.15
CHKAP35790 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16■□□□□ 0.15
CHKAP35790 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CHKAP35790 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16■□□□□ 0.15
CHKAP35790 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16■□□□□ 0.15
CHKAP35790 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16■□□□□ 0.15
CHKAP35790 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CHKAP35790 AC093433.1-201ENST00000458048 571 ntBASIC16■□□□□ 0.15
CHKAP35790 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16■□□□□ 0.15
CHKAP35790 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CHKAP35790 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16■□□□□ 0.15
CHKAP35790 AP005482.1-201ENST00000563722 1273 ntBASIC16■□□□□ 0.15
CHKAP35790 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16■□□□□ 0.15
CHKAP35790 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16■□□□□ 0.15
CHKAP35790 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 AC005252.2-201ENST00000624630 1141 ntBASIC16■□□□□ 0.15
CHKAP35790 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16■□□□□ 0.15
CHKAP35790 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHKAP35790 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms