Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
USP6P35125 AHCYP4-201ENST00000419201 1315 ntBASIC20.03■□□□□ 0.8
USP6P35125 MRPL37P1-201ENST00000592451 1337 ntBASIC20.03■□□□□ 0.8
USP6P35125 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
USP6P35125 ACE3P-201ENST00000423435 1973 ntBASIC20.03■□□□□ 0.8
USP6P35125 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.03■□□□□ 0.8
USP6P35125 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
USP6P35125 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP6P35125 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC20.02■□□□□ 0.8
USP6P35125 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP6P35125 SOD2-202ENST00000367054 815 ntTSL 2 BASIC20.02■□□□□ 0.8
USP6P35125 PFN2-202ENST00000423691 911 ntTSL 2 BASIC20.02■□□□□ 0.8
USP6P35125 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP6P35125 AP000358.1-201ENST00000456260 156 ntBASIC20.02■□□□□ 0.8
USP6P35125 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP6P35125 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
USP6P35125 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
USP6P35125 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC20.02■□□□□ 0.8
USP6P35125 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC20.02■□□□□ 0.8
USP6P35125 LINC01783-202ENST00000614408 828 ntBASIC20.02■□□□□ 0.8
USP6P35125 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
USP6P35125 BX284668.2-205ENST00000619677 828 ntBASIC20.02■□□□□ 0.8
USP6P35125 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC20.02■□□□□ 0.8
USP6P35125 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP6P35125 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC20.02■□□□□ 0.8
USP6P35125 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP6P35125 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP6P35125 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.02■□□□□ 0.8
USP6P35125 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP6P35125 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.02■□□□□ 0.8
USP6P35125 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC20.02■□□□□ 0.8
USP6P35125 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
USP6P35125 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
USP6P35125 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.02■□□□□ 0.8
USP6P35125 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP6P35125 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP6P35125 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
USP6P35125 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP6P35125 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC20.02■□□□□ 0.8
USP6P35125 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
USP6P35125 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP6P35125 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
USP6P35125 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC20.02■□□□□ 0.79
USP6P35125 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC20.02■□□□□ 0.79
USP6P35125 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
USP6P35125 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP6P35125 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
USP6P35125 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP6P35125 AL583805.1-201ENST00000391389 531 ntBASIC20.02■□□□□ 0.79
USP6P35125 RN7SL8P-201ENST00000461771 266 ntBASIC20.02■□□□□ 0.79
USP6P35125 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC20.02■□□□□ 0.79
USP6P35125 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
USP6P35125 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC20.02■□□□□ 0.79
USP6P35125 AC135983.4-201ENST00000564116 1262 ntBASIC20.02■□□□□ 0.79
USP6P35125 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC20.02■□□□□ 0.79
USP6P35125 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC20.02■□□□□ 0.79
USP6P35125 AL022334.2-201ENST00000610000 484 ntBASIC20.02■□□□□ 0.79
USP6P35125 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
USP6P35125 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.01■□□□□ 0.79
USP6P35125 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
USP6P35125 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.01■□□□□ 0.79
USP6P35125 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC20.01■□□□□ 0.79
USP6P35125 CELP-203ENST00000624767 2414 ntTSL 5 BASIC20.01■□□□□ 0.79
USP6P35125 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP6P35125 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP6P35125 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP6P35125 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP6P35125 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC20.01■□□□□ 0.79
USP6P35125 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP6P35125 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC20.01■□□□□ 0.79
USP6P35125 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
USP6P35125 AC092135.3-201ENST00000624151 1846 ntBASIC20.01■□□□□ 0.79
USP6P35125 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP6P35125 LCK-206ENST00000373564 2137 ntTSL 5 BASIC20.01■□□□□ 0.79
USP6P35125 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC20.01■□□□□ 0.79
USP6P35125 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.01■□□□□ 0.79
USP6P35125 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP6P35125 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP6P35125 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP6P35125 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP6P35125 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP6P35125 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC20.01■□□□□ 0.79
USP6P35125 NAGK-204ENST00000443872 878 ntTSL 3 BASIC20.01■□□□□ 0.79
USP6P35125 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP6P35125 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC20.01■□□□□ 0.79
USP6P35125 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC20.01■□□□□ 0.79
USP6P35125 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC20.01■□□□□ 0.79
USP6P35125 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC20.01■□□□□ 0.79
USP6P35125 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC20.01■□□□□ 0.79
USP6P35125 AC009093.10-201ENST00000641956 1442 ntBASIC20.01■□□□□ 0.79
USP6P35125 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.01■□□□□ 0.79
USP6P35125 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
USP6P35125 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20■□□□□ 0.79
USP6P35125 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC20■□□□□ 0.79
USP6P35125 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP6P35125 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP6P35125 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP6P35125 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms