Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 FGD5P1-202ENST00000614866 2498 ntBASIC15.01□□□□□ -0.01
VARSP26640 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.01□□□□□ -0.01
VARSP26640 REXO1L2P-201ENST00000425429 2069 ntBASIC15.01□□□□□ -0.01
VARSP26640 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
VARSP26640 AL133267.1-201ENST00000398220 340 ntBASIC15.01□□□□□ -0.01
VARSP26640 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.01□□□□□ -0.01
VARSP26640 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.01□□□□□ -0.01
VARSP26640 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.01□□□□□ -0.01
VARSP26640 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.01□□□□□ -0.01
VARSP26640 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.01□□□□□ -0.01
VARSP26640 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
VARSP26640 GIMAP3P-201ENST00000495150 836 ntBASIC15.01□□□□□ -0.01
VARSP26640 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
VARSP26640 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.01□□□□□ -0.01
VARSP26640 AC106886.1-201ENST00000568660 600 ntBASIC15.01□□□□□ -0.01
VARSP26640 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.01□□□□□ -0.01
VARSP26640 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.01□□□□□ -0.01
VARSP26640 AL132655.2-201ENST00000596276 594 ntBASIC15.01□□□□□ -0.01
VARSP26640 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.01□□□□□ -0.01
VARSP26640 SRD5A3P1-201ENST00000603021 949 ntBASIC15.01□□□□□ -0.01
VARSP26640 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
VARSP26640 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.01□□□□□ -0.01
VARSP26640 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.01□□□□□ -0.01
VARSP26640 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
VARSP26640 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.01□□□□□ -0.01
VARSP26640 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
VARSP26640 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARSP26640 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15□□□□□ -0.01
VARSP26640 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
VARSP26640 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VARSP26640 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15□□□□□ -0.01
VARSP26640 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
VARSP26640 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
VARSP26640 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
VARSP26640 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15□□□□□ -0.01
VARSP26640 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15□□□□□ -0.01
VARSP26640 KRT18P43-201ENST00000469825 1281 ntBASIC15□□□□□ -0.01
VARSP26640 AC093004.1-201ENST00000508850 424 ntBASIC15□□□□□ -0.01
VARSP26640 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15□□□□□ -0.01
VARSP26640 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15□□□□□ -0.01
VARSP26640 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15□□□□□ -0.01
VARSP26640 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
VARSP26640 AL162274.1-201ENST00000617191 1098 ntBASIC15□□□□□ -0.01
VARSP26640 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15□□□□□ -0.01
VARSP26640 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15□□□□□ -0.01
VARSP26640 AL158212.4-201ENST00000624062 1286 ntBASIC15□□□□□ -0.01
VARSP26640 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
VARSP26640 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15□□□□□ -0.01
VARSP26640 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15□□□□□ -0.01
VARSP26640 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VARSP26640 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 CYP2AB1P-202ENST00000454440 1456 ntBASIC15□□□□□ -0.01
VARSP26640 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
VARSP26640 COL6A4P2-202ENST00000504443 2753 ntBASIC15□□□□□ -0.01
VARSP26640 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
VARSP26640 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
VARSP26640 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15□□□□□ -0.01
VARSP26640 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
VARSP26640 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15□□□□□ -0.01
VARSP26640 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15□□□□□ -0.01
VARSP26640 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.99□□□□□ -0.01
VARSP26640 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms