Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.74□□□□□ -0.37
LMO1P25800 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.74□□□□□ -0.37
LMO1P25800 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 AC190387.1-201ENST00000551683 408 ntBASIC12.74□□□□□ -0.37
LMO1P25800 AC120045.2-201ENST00000567334 178 ntBASIC12.74□□□□□ -0.37
LMO1P25800 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.74□□□□□ -0.37
LMO1P25800 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.74□□□□□ -0.37
LMO1P25800 MIR4745-201ENST00000577608 62 ntBASIC12.74□□□□□ -0.37
LMO1P25800 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.74□□□□□ -0.37
LMO1P25800 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.74□□□□□ -0.37
LMO1P25800 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.74□□□□□ -0.37
LMO1P25800 TMEM261P1-201ENST00000604899 340 ntBASIC12.74□□□□□ -0.37
LMO1P25800 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.74□□□□□ -0.37
LMO1P25800 MIR8072-201ENST00000614241 80 ntBASIC12.74□□□□□ -0.37
LMO1P25800 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.74□□□□□ -0.37
LMO1P25800 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.74□□□□□ -0.37
LMO1P25800 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LMO1P25800 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LMO1P25800 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LMO1P25800 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LMO1P25800 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.74□□□□□ -0.37
LMO1P25800 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.74□□□□□ -0.37
LMO1P25800 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
LMO1P25800 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO1P25800 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 KRT8P22-201ENST00000562317 1415 ntBASIC12.73□□□□□ -0.37
LMO1P25800 CICP20-201ENST00000443330 2801 ntBASIC12.73□□□□□ -0.37
LMO1P25800 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LMO1P25800 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.73□□□□□ -0.37
LMO1P25800 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 AC087499.6-201ENST00000411576 835 ntBASIC12.73□□□□□ -0.37
LMO1P25800 FAM207CP-201ENST00000443486 507 ntBASIC12.73□□□□□ -0.37
LMO1P25800 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.73□□□□□ -0.37
LMO1P25800 AC114812.1-204ENST00000449669 728 ntBASIC12.73□□□□□ -0.37
LMO1P25800 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.73□□□□□ -0.37
LMO1P25800 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.73□□□□□ -0.37
LMO1P25800 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.73□□□□□ -0.37
LMO1P25800 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.73□□□□□ -0.37
LMO1P25800 AC092552.1-201ENST00000547243 906 ntBASIC12.73□□□□□ -0.37
LMO1P25800 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.73□□□□□ -0.37
LMO1P25800 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.73□□□□□ -0.37
LMO1P25800 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.73□□□□□ -0.37
LMO1P25800 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.73□□□□□ -0.37
LMO1P25800 AL603764.1-201ENST00000636452 321 ntBASIC12.73□□□□□ -0.37
LMO1P25800 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LMO1P25800 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LMO1P25800 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO1P25800 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LMO1P25800 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LMO1P25800 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO1P25800 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO1P25800 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO1P25800 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
LMO1P25800 AC107918.4-201ENST00000641966 3141 ntBASIC12.73□□□□□ -0.37
LMO1P25800 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LMO1P25800 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO1P25800 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LMO1P25800 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO1P25800 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LMO1P25800 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO1P25800 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO1P25800 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
LMO1P25800 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms