Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.18■□□□□ 0.5
NCLP19338 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.18■□□□□ 0.5
NCLP19338 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
NCLP19338 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
NCLP19338 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCLP19338 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NCLP19338 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
NCLP19338 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NCLP19338 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NCLP19338 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 MIR770-201ENST00000390219 98 ntBASIC18.17■□□□□ 0.5
NCLP19338 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.17■□□□□ 0.5
NCLP19338 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 AL512356.2-201ENST00000546955 174 ntBASIC18.17■□□□□ 0.5
NCLP19338 HNRNPUP1-201ENST00000554987 333 ntBASIC18.17■□□□□ 0.5
NCLP19338 AP000842.3-202ENST00000569238 1080 ntBASIC18.17■□□□□ 0.5
NCLP19338 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.17■□□□□ 0.5
NCLP19338 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NCLP19338 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC18.17■□□□□ 0.5
NCLP19338 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NCLP19338 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NCLP19338 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLP19338 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.17■□□□□ 0.5
NCLP19338 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NCLP19338 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC18.16■□□□□ 0.5
NCLP19338 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC18.16■□□□□ 0.5
NCLP19338 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NCLP19338 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC18.16■□□□□ 0.5
NCLP19338 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NCLP19338 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.16■□□□□ 0.5
NCLP19338 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC18.16■□□□□ 0.5
NCLP19338 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.16■□□□□ 0.5
NCLP19338 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.16■□□□□ 0.5
NCLP19338 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.16■□□□□ 0.5
NCLP19338 AC026979.3-201ENST00000607315 403 ntBASIC18.16■□□□□ 0.5
NCLP19338 AC093512.1-201ENST00000617969 520 ntBASIC18.16■□□□□ 0.5
NCLP19338 AP001059.3-201ENST00000619053 235 ntBASIC18.16■□□□□ 0.5
NCLP19338 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC18.16■□□□□ 0.5
NCLP19338 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
NCLP19338 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NCLP19338 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 WASH3P-207ENST00000560956 1394 ntBASIC18.16■□□□□ 0.5
NCLP19338 FO538757.1-201ENST00000623083 1397 ntBASIC18.16■□□□□ 0.5
NCLP19338 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLP19338 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC18.15■□□□□ 0.5
NCLP19338 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 UXT-AS1-201ENST00000590504 1525 ntBASIC18.15■□□□□ 0.5
NCLP19338 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.15■□□□□ 0.5
NCLP19338 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NCLP19338 FAM8A3P-201ENST00000427218 844 ntBASIC18.15■□□□□ 0.5
NCLP19338 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.15■□□□□ 0.5
NCLP19338 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.15■□□□□ 0.5
NCLP19338 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.15■□□□□ 0.5
NCLP19338 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.15■□□□□ 0.5
NCLP19338 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.15■□□□□ 0.5
NCLP19338 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.15■□□□□ 0.5
NCLP19338 AL607033.1-201ENST00000623900 1599 ntBASIC18.15■□□□□ 0.5
NCLP19338 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NCLP19338 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NCLP19338 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NCLP19338 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCLP19338 AC107918.4-201ENST00000641966 3141 ntBASIC18.15■□□□□ 0.5
NCLP19338 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms