Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 SOCS2P1-201ENST00000417727 557 ntBASIC13.61□□□□□ -0.23
HLA-DOBP13765 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 AC140912.1-201ENST00000577171 1054 ntBASIC13.61□□□□□ -0.23
HLA-DOBP13765 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 AC133539.2-201ENST00000604757 467 ntBASIC13.61□□□□□ -0.23
HLA-DOBP13765 WFDC1-204ENST00000613603 549 ntBASIC13.61□□□□□ -0.23
HLA-DOBP13765 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 MTHFR-210ENST00000641407 2387 ntBASIC13.61□□□□□ -0.23
HLA-DOBP13765 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DOBP13765 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DOBP13765 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.6□□□□□ -0.23
HLA-DOBP13765 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 DGCR5-201ENST00000399539 862 ntBASIC13.6□□□□□ -0.23
HLA-DOBP13765 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 AL390755.1-201ENST00000623716 2027 ntBASIC13.6□□□□□ -0.23
HLA-DOBP13765 AC005252.2-201ENST00000624630 1141 ntBASIC13.6□□□□□ -0.23
HLA-DOBP13765 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
HLA-DOBP13765 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms