Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC079328.2-201ENST00000561241 3354 ntBASIC25.68■■□□□ 1.7
TOP2AP11388 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TOP2AP11388 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
TOP2AP11388 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TOP2AP11388 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
TOP2AP11388 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC25.68■■□□□ 1.7
TOP2AP11388 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TOP2AP11388 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TOP2AP11388 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC25.68■■□□□ 1.7
TOP2AP11388 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TOP2AP11388 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
TOP2AP11388 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TOP2AP11388 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC25.68■■□□□ 1.7
TOP2AP11388 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
TOP2AP11388 RN7SKP109-201ENST00000410592 316 ntBASIC25.68■■□□□ 1.7
TOP2AP11388 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC25.68■■□□□ 1.7
TOP2AP11388 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC25.68■■□□□ 1.7
TOP2AP11388 ALG1L6P-201ENST00000515248 758 ntBASIC25.68■■□□□ 1.7
TOP2AP11388 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TOP2AP11388 AL022344.2-201ENST00000568976 968 ntBASIC25.68■■□□□ 1.7
TOP2AP11388 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TOP2AP11388 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC25.67■■□□□ 1.7
TOP2AP11388 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
TOP2AP11388 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC25.67■■□□□ 1.7
TOP2AP11388 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TOP2AP11388 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
TOP2AP11388 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
TOP2AP11388 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC25.67■■□□□ 1.7
TOP2AP11388 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
TOP2AP11388 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TOP2AP11388 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC25.67■■□□□ 1.7
TOP2AP11388 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC25.67■■□□□ 1.7
TOP2AP11388 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC25.67■■□□□ 1.7
TOP2AP11388 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TOP2AP11388 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC25.67■■□□□ 1.7
TOP2AP11388 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC25.67■■□□□ 1.7
TOP2AP11388 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
TOP2AP11388 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC25.67■■□□□ 1.7
TOP2AP11388 DPY19L2P5-201ENST00000456300 331 ntBASIC25.67■■□□□ 1.7
TOP2AP11388 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
TOP2AP11388 AC010234.1-201ENST00000494599 870 ntBASIC25.67■■□□□ 1.7
TOP2AP11388 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC25.67■■□□□ 1.7
TOP2AP11388 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC25.67■■□□□ 1.7
TOP2AP11388 RN7SL470P-201ENST00000583069 259 ntBASIC25.67■■□□□ 1.7
TOP2AP11388 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC25.67■■□□□ 1.7
TOP2AP11388 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC25.67■■□□□ 1.7
TOP2AP11388 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TOP2AP11388 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC25.66■■□□□ 1.7
TOP2AP11388 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TOP2AP11388 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TOP2AP11388 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
TOP2AP11388 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC25.66■■□□□ 1.7
TOP2AP11388 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TOP2AP11388 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC25.66■■□□□ 1.7
TOP2AP11388 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TOP2AP11388 MIR1227-201ENST00000408484 88 ntBASIC25.66■■□□□ 1.7
TOP2AP11388 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TOP2AP11388 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC25.66■■□□□ 1.7
TOP2AP11388 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC25.66■■□□□ 1.7
TOP2AP11388 RNA5SP417-201ENST00000516459 108 ntBASIC25.66■■□□□ 1.7
TOP2AP11388 ALG1L13P-202ENST00000519320 584 ntBASIC25.66■■□□□ 1.7
TOP2AP11388 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TOP2AP11388 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC25.66■■□□□ 1.7
TOP2AP11388 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC25.66■■□□□ 1.7
TOP2AP11388 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TOP2AP11388 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
TOP2AP11388 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TOP2AP11388 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC25.66■■□□□ 1.7
TOP2AP11388 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC25.66■■□□□ 1.7
TOP2AP11388 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
TOP2AP11388 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TOP2AP11388 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC25.66■■□□□ 1.7
TOP2AP11388 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC25.66■■□□□ 1.7
TOP2AP11388 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
TOP2AP11388 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
TOP2AP11388 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TOP2AP11388 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC25.65■■□□□ 1.7
TOP2AP11388 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC25.65■■□□□ 1.7
TOP2AP11388 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TOP2AP11388 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TOP2AP11388 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TOP2AP11388 CELP-201ENST00000411440 1249 ntTSL 5 BASIC25.65■■□□□ 1.7
TOP2AP11388 PSMD4P1-201ENST00000433951 1109 ntBASIC25.65■■□□□ 1.7
TOP2AP11388 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TOP2AP11388 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC25.65■■□□□ 1.7
TOP2AP11388 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TOP2AP11388 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC25.65■■□□□ 1.7
TOP2AP11388 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC25.65■■□□□ 1.7
TOP2AP11388 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TOP2AP11388 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TOP2AP11388 DOC2GP-204ENST00000639052 2548 ntBASIC25.65■■□□□ 1.7
TOP2AP11388 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
TOP2AP11388 LTB4R2-202ENST00000528054 3092 ntBASIC25.65■■□□□ 1.7
TOP2AP11388 PRAL-201ENST00000624952 3286 ntBASIC25.65■■□□□ 1.7
TOP2AP11388 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
TOP2AP11388 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
TOP2AP11388 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TOP2AP11388 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TOP2AP11388 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TOP2AP11388 STK16-203ENST00000409516 895 ntTSL 2 BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms