Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD28P10747 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CD28P10747 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.88□□□□□ -0.51
CD28P10747 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.88□□□□□ -0.51
CD28P10747 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD28P10747 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CD28P10747 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.87□□□□□ -0.51
CD28P10747 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CD28P10747 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 AL365203.3-201ENST00000609742 2057 ntBASIC11.87□□□□□ -0.51
CD28P10747 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 AGER-203ENST00000375065 665 ntTSL 2 BASIC11.87□□□□□ -0.51
CD28P10747 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CD28P10747 AL645937.2-201ENST00000396808 931 ntBASIC11.87□□□□□ -0.51
CD28P10747 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.87□□□□□ -0.51
CD28P10747 AC245100.3-201ENST00000441281 285 ntBASIC11.87□□□□□ -0.51
CD28P10747 AL591846.1-201ENST00000451736 433 ntBASIC11.87□□□□□ -0.51
CD28P10747 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC11.87□□□□□ -0.51
CD28P10747 SAMD11P1-201ENST00000571429 661 ntBASIC11.87□□□□□ -0.51
CD28P10747 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC11.87□□□□□ -0.51
CD28P10747 AC104982.3-201ENST00000581995 514 ntBASIC11.87□□□□□ -0.51
CD28P10747 CYGB-203ENST00000589145 788 ntTSL 3 BASIC11.87□□□□□ -0.51
CD28P10747 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.87□□□□□ -0.51
CD28P10747 AC005695.3-201ENST00000614522 232 ntBASIC11.87□□□□□ -0.51
CD28P10747 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.87□□□□□ -0.51
CD28P10747 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CD28P10747 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CD28P10747 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.87□□□□□ -0.51
CD28P10747 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.87□□□□□ -0.51
CD28P10747 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CD28P10747 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.87□□□□□ -0.51
CD28P10747 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD28P10747 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 GRN-222ENST00000639447 1314 ntTSL 2 BASIC11.86□□□□□ -0.51
CD28P10747 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 KRT8P14-201ENST00000414254 1442 ntBASIC11.86□□□□□ -0.51
CD28P10747 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 AC015818.8-201ENST00000587907 1519 ntBASIC11.86□□□□□ -0.51
CD28P10747 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CD28P10747 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.86□□□□□ -0.51
CD28P10747 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CD28P10747 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CD28P10747 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.86□□□□□ -0.51
CD28P10747 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CD28P10747 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CD28P10747 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CD28P10747 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.86□□□□□ -0.51
CD28P10747 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD28P10747 FAM8A4P-201ENST00000435433 1213 ntBASIC11.86□□□□□ -0.51
CD28P10747 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.86□□□□□ -0.51
CD28P10747 CNN2P10-201ENST00000443067 918 ntBASIC11.86□□□□□ -0.51
CD28P10747 OARD1-212ENST00000482515 832 ntTSL 2 BASIC11.86□□□□□ -0.51
CD28P10747 RPSAP36-202ENST00000494591 1261 ntBASIC11.86□□□□□ -0.51
CD28P10747 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.86□□□□□ -0.51
CD28P10747 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.86□□□□□ -0.51
CD28P10747 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.86□□□□□ -0.51
CD28P10747 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.86□□□□□ -0.51
CD28P10747 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC11.86□□□□□ -0.51
CD28P10747 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms