Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CXCL1P09341 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.79□□□□□ -0.52
CXCL1P09341 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CXCL1P09341 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.79□□□□□ -0.52
CXCL1P09341 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.79□□□□□ -0.52
CXCL1P09341 TSPY19P-201ENST00000418461 509 ntBASIC11.79□□□□□ -0.52
CXCL1P09341 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 TSPY18P-201ENST00000441642 509 ntBASIC11.79□□□□□ -0.52
CXCL1P09341 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 AC073648.2-201ENST00000510116 352 ntBASIC11.79□□□□□ -0.52
CXCL1P09341 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.79□□□□□ -0.52
CXCL1P09341 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.79□□□□□ -0.52
CXCL1P09341 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.79□□□□□ -0.52
CXCL1P09341 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.79□□□□□ -0.52
CXCL1P09341 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.79□□□□□ -0.52
CXCL1P09341 AL078644.1-201ENST00000609881 752 ntBASIC11.79□□□□□ -0.52
CXCL1P09341 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.79□□□□□ -0.52
CXCL1P09341 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CXCL1P09341 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.79□□□□□ -0.52
CXCL1P09341 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
CXCL1P09341 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CXCL1P09341 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CXCL1P09341 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CXCL1P09341 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.78□□□□□ -0.52
CXCL1P09341 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CXCL1P09341 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.78□□□□□ -0.52
CXCL1P09341 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.78□□□□□ -0.52
CXCL1P09341 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.78□□□□□ -0.52
CXCL1P09341 AC111170.3-201ENST00000624282 2464 ntBASIC11.78□□□□□ -0.52
CXCL1P09341 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.78□□□□□ -0.52
CXCL1P09341 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.78□□□□□ -0.52
CXCL1P09341 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CXCL1P09341 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.78□□□□□ -0.52
CXCL1P09341 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 AC108073.2-201ENST00000464002 357 ntBASIC11.78□□□□□ -0.52
CXCL1P09341 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CXCL1P09341 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.78□□□□□ -0.52
CXCL1P09341 AC105339.3-201ENST00000560043 636 ntBASIC11.78□□□□□ -0.52
CXCL1P09341 AC243562.2-201ENST00000561247 970 ntBASIC11.78□□□□□ -0.52
CXCL1P09341 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CXCL1P09341 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.78□□□□□ -0.52
CXCL1P09341 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CXCL1P09341 LINC01711-201ENST00000598340 967 ntBASIC11.78□□□□□ -0.52
CXCL1P09341 AL356488.2-201ENST00000602755 427 ntBASIC11.78□□□□□ -0.52
CXCL1P09341 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.78□□□□□ -0.52
CXCL1P09341 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CXCL1P09341 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CXCL1P09341 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms