Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC9.37□□□□□ -0.91
PKHD1P08F94 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC9.37□□□□□ -0.91
PKHD1P08F94 AC080013.5-201ENST00000607044 679 ntBASIC9.37□□□□□ -0.91
PKHD1P08F94 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC9.37□□□□□ -0.91
PKHD1P08F94 AC139713.2-207ENST00000641556 1292 ntBASIC9.37□□□□□ -0.91
PKHD1P08F94 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PKHD1P08F94 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
PKHD1P08F94 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PKHD1P08F94 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PKHD1P08F94 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC9.37□□□□□ -0.91
PKHD1P08F94 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
PKHD1P08F94 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PKHD1P08F94 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PKHD1P08F94 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PKHD1P08F94 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
PKHD1P08F94 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PKHD1P08F94 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
PKHD1P08F94 JPT2-203ENST00000382711 894 ntTSL 4 BASIC9.37□□□□□ -0.91
PKHD1P08F94 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC9.37□□□□□ -0.91
PKHD1P08F94 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC9.37□□□□□ -0.91
PKHD1P08F94 NME6-208ENST00000435684 599 ntTSL 2 BASIC9.37□□□□□ -0.91
PKHD1P08F94 BCRP4-201ENST00000506079 804 ntBASIC9.37□□□□□ -0.91
PKHD1P08F94 AC226150.1-201ENST00000544259 466 ntBASIC9.37□□□□□ -0.91
PKHD1P08F94 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC9.37□□□□□ -0.91
PKHD1P08F94 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC9.37□□□□□ -0.91
PKHD1P08F94 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
PKHD1P08F94 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PKHD1P08F94 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
PKHD1P08F94 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PKHD1P08F94 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PKHD1P08F94 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 AHCYP3-201ENST00000420053 1279 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC9.36□□□□□ -0.91
PKHD1P08F94 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC9.36□□□□□ -0.91
PKHD1P08F94 HERC2P11-201ENST00000562845 725 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 AC084262.1-201ENST00000567818 751 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 AC100756.2-201ENST00000569537 736 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
PKHD1P08F94 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC9.36□□□□□ -0.91
PKHD1P08F94 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC9.36□□□□□ -0.91
PKHD1P08F94 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 AC004466.2-201ENST00000614749 516 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC9.36□□□□□ -0.91
PKHD1P08F94 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC9.36□□□□□ -0.91
PKHD1P08F94 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC9.36□□□□□ -0.91
PKHD1P08F94 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC9.36□□□□□ -0.91
PKHD1P08F94 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC9.36□□□□□ -0.91
PKHD1P08F94 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC9.36□□□□□ -0.91
PKHD1P08F94 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC9.36□□□□□ -0.91
PKHD1P08F94 ZBED1P1-201ENST00000502364 1930 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC9.36□□□□□ -0.91
PKHD1P08F94 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC9.36□□□□□ -0.91
PKHD1P08F94 AL451000.1-201ENST00000451300 1186 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 RN7SL147P-201ENST00000487345 298 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC9.36□□□□□ -0.91
PKHD1P08F94 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
PKHD1P08F94 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
PKHD1P08F94 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC9.36□□□□□ -0.91
PKHD1P08F94 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
PKHD1P08F94 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC9.36□□□□□ -0.91
PKHD1P08F94 FUCA1P1-201ENST00000374476 1351 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
PKHD1P08F94 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC9.36□□□□□ -0.91
PKHD1P08F94 TLE1P1-201ENST00000422965 589 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 AC098934.1-203ENST00000442868 1262 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC9.36□□□□□ -0.91
PKHD1P08F94 RN7SL357P-201ENST00000581065 298 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC9.36□□□□□ -0.91
PKHD1P08F94 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC9.36□□□□□ -0.91
PKHD1P08F94 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC9.36□□□□□ -0.91
PKHD1P08F94 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC9.36□□□□□ -0.91
PKHD1P08F94 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC9.36□□□□□ -0.91
PKHD1P08F94 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC9.36□□□□□ -0.91
PKHD1P08F94 PGAM1P11-201ENST00000416729 680 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 AL512599.1-201ENST00000430724 685 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 AC027612.2-202ENST00000445955 1199 ntBASIC9.36□□□□□ -0.91
PKHD1P08F94 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC9.36□□□□□ -0.91
PKHD1P08F94 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC9.36□□□□□ -0.91
PKHD1P08F94 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
PKHD1P08F94 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
PKHD1P08F94 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PKHD1P08F94 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PKHD1P08F94 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PKHD1P08F94 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PKHD1P08F94 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PKHD1P08F94 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PKHD1P08F94 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms