Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.76□□□□□ -0.37
CD74P04233 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.76□□□□□ -0.37
CD74P04233 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
CD74P04233 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.76□□□□□ -0.37
CD74P04233 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CD74P04233 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.76□□□□□ -0.37
CD74P04233 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
CD74P04233 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.76□□□□□ -0.37
CD74P04233 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CD74P04233 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.76□□□□□ -0.37
CD74P04233 KRT18P64-201ENST00000434946 1219 ntBASIC12.76□□□□□ -0.37
CD74P04233 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.76□□□□□ -0.37
CD74P04233 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.76□□□□□ -0.37
CD74P04233 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
CD74P04233 SLC25A39P2-201ENST00000537614 270 ntBASIC12.76□□□□□ -0.37
CD74P04233 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.76□□□□□ -0.37
CD74P04233 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CD74P04233 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 AC034105.1-201ENST00000563488 319 ntBASIC12.76□□□□□ -0.37
CD74P04233 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.76□□□□□ -0.37
CD74P04233 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.76□□□□□ -0.37
CD74P04233 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.76□□□□□ -0.37
CD74P04233 AC091812.2-201ENST00000619081 385 ntBASIC12.76□□□□□ -0.37
CD74P04233 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
CD74P04233 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
CD74P04233 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 KRT8P12-202ENST00000472924 1397 ntBASIC12.76□□□□□ -0.37
CD74P04233 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.76□□□□□ -0.37
CD74P04233 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CD74P04233 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.76□□□□□ -0.37
CD74P04233 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.76□□□□□ -0.37
CD74P04233 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CD74P04233 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.76□□□□□ -0.37
CD74P04233 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CD74P04233 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CD74P04233 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.76□□□□□ -0.37
CD74P04233 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 AC023794.5-201ENST00000564380 2157 ntBASIC12.76□□□□□ -0.37
CD74P04233 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.76□□□□□ -0.37
CD74P04233 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD74P04233 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.75□□□□□ -0.37
CD74P04233 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CD74P04233 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.75□□□□□ -0.37
CD74P04233 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.75□□□□□ -0.37
CD74P04233 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CD74P04233 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.75□□□□□ -0.37
CD74P04233 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
CD74P04233 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 AC004945.1-201ENST00000416738 983 ntBASIC12.75□□□□□ -0.37
CD74P04233 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.75□□□□□ -0.37
CD74P04233 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.75□□□□□ -0.37
CD74P04233 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.75□□□□□ -0.37
CD74P04233 SPDYE11-202ENST00000450699 704 ntBASIC12.75□□□□□ -0.37
CD74P04233 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.75□□□□□ -0.37
CD74P04233 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
CD74P04233 AC079140.1-201ENST00000508039 487 ntBASIC12.75□□□□□ -0.37
CD74P04233 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.75□□□□□ -0.37
CD74P04233 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD74P04233 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.75□□□□□ -0.37
CD74P04233 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms