Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
MT-ND3P03897 AC005840.4-201ENST00000541242 2494 ntBASIC15.52■□□□□ 0.08
MT-ND3P03897 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.52■□□□□ 0.08
MT-ND3P03897 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
MT-ND3P03897 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.52■□□□□ 0.08
MT-ND3P03897 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND3P03897 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.52■□□□□ 0.08
MT-ND3P03897 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND3P03897 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.52■□□□□ 0.08
MT-ND3P03897 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND3P03897 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.52■□□□□ 0.08
MT-ND3P03897 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.52■□□□□ 0.08
MT-ND3P03897 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND3P03897 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.52■□□□□ 0.08
MT-ND3P03897 MTND6P24-201ENST00000440466 518 ntBASIC15.52■□□□□ 0.08
MT-ND3P03897 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND3P03897 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.52■□□□□ 0.08
MT-ND3P03897 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.52■□□□□ 0.08
MT-ND3P03897 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.52■□□□□ 0.08
MT-ND3P03897 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND3P03897 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.52■□□□□ 0.08
MT-ND3P03897 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.52■□□□□ 0.08
MT-ND3P03897 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.52■□□□□ 0.08
MT-ND3P03897 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.52■□□□□ 0.08
MT-ND3P03897 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.52■□□□□ 0.08
MT-ND3P03897 RN7SL828P-201ENST00000607615 303 ntBASIC15.52■□□□□ 0.08
MT-ND3P03897 AL589739.1-201ENST00000607720 493 ntBASIC15.52■□□□□ 0.08
MT-ND3P03897 AC018529.2-202ENST00000611482 3087 ntBASIC15.52■□□□□ 0.08
MT-ND3P03897 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND3P03897 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
MT-ND3P03897 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MT-ND3P03897 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MT-ND3P03897 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
MT-ND3P03897 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
MT-ND3P03897 AC113367.3-201ENST00000508316 1912 ntBASIC15.52■□□□□ 0.07
MT-ND3P03897 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.52■□□□□ 0.07
MT-ND3P03897 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
MT-ND3P03897 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MT-ND3P03897 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MT-ND3P03897 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MT-ND3P03897 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MT-ND3P03897 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MT-ND3P03897 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
MT-ND3P03897 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MT-ND3P03897 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.52■□□□□ 0.07
MT-ND3P03897 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-ND3P03897 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-ND3P03897 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MT-ND3P03897 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
MT-ND3P03897 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.51■□□□□ 0.07
MT-ND3P03897 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
MT-ND3P03897 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MT-ND3P03897 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 MIR661-201ENST00000384842 89 ntBASIC15.51■□□□□ 0.07
MT-ND3P03897 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.51■□□□□ 0.07
MT-ND3P03897 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
MT-ND3P03897 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.51■□□□□ 0.07
MT-ND3P03897 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.51■□□□□ 0.07
MT-ND3P03897 TSSK5P-201ENST00000423978 907 ntBASIC15.51■□□□□ 0.07
MT-ND3P03897 AC005034.1-201ENST00000426657 489 ntBASIC15.51■□□□□ 0.07
MT-ND3P03897 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.51■□□□□ 0.07
MT-ND3P03897 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.51■□□□□ 0.07
MT-ND3P03897 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.51■□□□□ 0.07
MT-ND3P03897 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 AC005225.4-201ENST00000557330 545 ntBASIC15.51■□□□□ 0.07
MT-ND3P03897 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
MT-ND3P03897 AC004233.3-201ENST00000607794 1269 ntBASIC15.51■□□□□ 0.07
MT-ND3P03897 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-ND3P03897 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
MT-ND3P03897 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MT-ND3P03897 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MT-ND3P03897 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
MT-ND3P03897 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
MT-ND3P03897 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-ND3P03897 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND3P03897 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms