Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
MT-ND1P03886 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.37□□□□□ -0.11
MT-ND1P03886 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.37□□□□□ -0.11
MT-ND1P03886 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
MT-ND1P03886 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.37□□□□□ -0.11
MT-ND1P03886 KRT18P32-201ENST00000424695 1287 ntBASIC14.37□□□□□ -0.11
MT-ND1P03886 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.37□□□□□ -0.11
MT-ND1P03886 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.37□□□□□ -0.11
MT-ND1P03886 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.37□□□□□ -0.11
MT-ND1P03886 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.37□□□□□ -0.11
MT-ND1P03886 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.37□□□□□ -0.11
MT-ND1P03886 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.37□□□□□ -0.11
MT-ND1P03886 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 AL513210.1-201ENST00000629608 234 ntBASIC14.37□□□□□ -0.11
MT-ND1P03886 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.37□□□□□ -0.11
MT-ND1P03886 MST1P2-201ENST00000457982 2291 ntBASIC14.37□□□□□ -0.11
MT-ND1P03886 AC005252.3-201ENST00000623855 2258 ntBASIC14.37□□□□□ -0.11
MT-ND1P03886 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
MT-ND1P03886 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.37□□□□□ -0.11
MT-ND1P03886 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
MT-ND1P03886 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
MT-ND1P03886 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.37□□□□□ -0.11
MT-ND1P03886 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
MT-ND1P03886 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.37□□□□□ -0.11
MT-ND1P03886 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
MT-ND1P03886 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 AC011474.4-201ENST00000623523 2076 ntBASIC14.37□□□□□ -0.11
MT-ND1P03886 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MT-ND1P03886 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
MT-ND1P03886 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
MT-ND1P03886 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MT-ND1P03886 COL6A4P2-202ENST00000504443 2753 ntBASIC14.36□□□□□ -0.11
MT-ND1P03886 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.36□□□□□ -0.11
MT-ND1P03886 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.36□□□□□ -0.11
MT-ND1P03886 AC015802.1-201ENST00000588104 1449 ntBASIC14.36□□□□□ -0.11
MT-ND1P03886 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.36□□□□□ -0.11
MT-ND1P03886 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MT-ND1P03886 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.36□□□□□ -0.11
MT-ND1P03886 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.36□□□□□ -0.11
MT-ND1P03886 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.36□□□□□ -0.11
MT-ND1P03886 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 TARDBPP1-201ENST00000442013 1203 ntBASIC14.36□□□□□ -0.11
MT-ND1P03886 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.36□□□□□ -0.11
MT-ND1P03886 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.36□□□□□ -0.11
MT-ND1P03886 YBX1P5-201ENST00000509441 847 ntBASIC14.36□□□□□ -0.11
MT-ND1P03886 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.36□□□□□ -0.11
MT-ND1P03886 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.36□□□□□ -0.11
MT-ND1P03886 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.36□□□□□ -0.11
MT-ND1P03886 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.36□□□□□ -0.11
MT-ND1P03886 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.36□□□□□ -0.11
MT-ND1P03886 AC018529.1-201ENST00000613063 361 ntBASIC14.36□□□□□ -0.11
MT-ND1P03886 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.36□□□□□ -0.11
MT-ND1P03886 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.36□□□□□ -0.11
MT-ND1P03886 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
MT-ND1P03886 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.36□□□□□ -0.11
MT-ND1P03886 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
MT-ND1P03886 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.36□□□□□ -0.11
MT-ND1P03886 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.36□□□□□ -0.11
MT-ND1P03886 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
MT-ND1P03886 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.36□□□□□ -0.11
MT-ND1P03886 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms