Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 KRT18P36-201ENST00000411618 1276 ntBASIC16.97■□□□□ 0.31
ALDH1A1P00352 AQP7P5-201ENST00000428759 1049 ntBASIC16.97■□□□□ 0.31
ALDH1A1P00352 AQP7P4-201ENST00000447083 1042 ntBASIC16.97■□□□□ 0.31
ALDH1A1P00352 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 AQP7P2-201ENST00000453967 1041 ntBASIC16.97■□□□□ 0.31
ALDH1A1P00352 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 RN7SL530P-201ENST00000485097 298 ntBASIC16.97■□□□□ 0.31
ALDH1A1P00352 RNA5SP417-201ENST00000516459 108 ntBASIC16.97■□□□□ 0.31
ALDH1A1P00352 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 AQP7P3-201ENST00000624547 1041 ntBASIC16.97■□□□□ 0.31
ALDH1A1P00352 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ALDH1A1P00352 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.97■□□□□ 0.31
ALDH1A1P00352 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ALDH1A1P00352 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALDH1A1P00352 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 AL512306.1-201ENST00000432698 848 ntBASIC16.96■□□□□ 0.31
ALDH1A1P00352 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ALDH1A1P00352 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ALDH1A1P00352 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 HERC2P11-201ENST00000562845 725 ntBASIC16.96■□□□□ 0.31
ALDH1A1P00352 AC100756.2-201ENST00000569537 736 ntBASIC16.96■□□□□ 0.31
ALDH1A1P00352 AC055811.3-201ENST00000584952 686 ntBASIC16.96■□□□□ 0.31
ALDH1A1P00352 AC005041.3-201ENST00000606287 649 ntBASIC16.96■□□□□ 0.31
ALDH1A1P00352 AC011471.3-201ENST00000623576 402 ntBASIC16.96■□□□□ 0.31
ALDH1A1P00352 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALDH1A1P00352 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALDH1A1P00352 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ALDH1A1P00352 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.96■□□□□ 0.31
ALDH1A1P00352 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALDH1A1P00352 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALDH1A1P00352 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALDH1A1P00352 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ALDH1A1P00352 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ALDH1A1P00352 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.96■□□□□ 0.3
ALDH1A1P00352 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.96■□□□□ 0.3
ALDH1A1P00352 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
ALDH1A1P00352 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ALDH1A1P00352 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ALDH1A1P00352 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ALDH1A1P00352 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
ALDH1A1P00352 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ALDH1A1P00352 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALDH1A1P00352 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALDH1A1P00352 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALDH1A1P00352 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ALDH1A1P00352 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ALDH1A1P00352 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALDH1A1P00352 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALDH1A1P00352 KRT17P4-201ENST00000429445 819 ntBASIC16.95■□□□□ 0.3
ALDH1A1P00352 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 AC140113.1-201ENST00000603467 169 ntBASIC16.95■□□□□ 0.3
ALDH1A1P00352 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms